Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_25440 |
Symbol | |
ID | 4381013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2223532 |
End bp | 2224215 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324608 |
Product | putative lipoprotein releasing system, ATP-binding protein |
Protein accession | YP_790186 |
Protein GI | 116050989 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGACA AGTCGGTGCT GAGTTGCCGC AACCTGAGCA AGAGCTACGA CGAGGGGCCG CAATCGGTGC AGGTGCTGTC CGGTGTCGAG TTGAACCTGC TGCCTGGGGA GCGGGTGGCT ATCGTCGGCA GCTCCGGTTC GGGCAAGAGC ACCTTGCTGA ACATGCTCGG CGGCCTGGAC ACGCCCTCCG CCGGCAGCGT CTGGCTCGCC GGCGAGGAAC TCTCGGCGCT GAACGAGACG GCCCGCGGGC TGCTGCGCAA CCGCGCGCTG GGCTTCGTCT ACCAGTTCCA CCACCTGTTG CCGGAGTTCA CCGCCCTGGA GAACGTCTGC ATGCCGCTGT TGATCGGCCG CACGCCGATC ACCGAAGCCC GCCAGCGGGC GGCCGAGCTG CTGGAGCGGG TCGGGCTGGG GCATCGCCTG TCGCACAAGC CGGCCGAGCT GTCCGGCGGC GAGCGCCAGC GGGTGGCGAT CGCCCGCGCG CTGGTCAACC GTCCGCAGCT GGTACTGCTC GACGAGCCCA CCGGCAACCT CGACCAGCAT ACCGCCCAGG GTATCCAGGA GCTGATGCTG GAACTGAGCC GTTCGTTGCA GACCTCGTTC CTGGTGGTAA CCCACGATCT CCAGCTGGCC GGGCACATGG ATCGCATCCT GCGCCTGGAA GAAGGCCGAC TGATCGCCGC GTAG
|
Protein sequence | MNDKSVLSCR NLSKSYDEGP QSVQVLSGVE LNLLPGERVA IVGSSGSGKS TLLNMLGGLD TPSAGSVWLA GEELSALNET ARGLLRNRAL GFVYQFHHLL PEFTALENVC MPLLIGRTPI TEARQRAAEL LERVGLGHRL SHKPAELSGG ERQRVAIARA LVNRPQLVLL DEPTGNLDQH TAQGIQELML ELSRSLQTSF LVVTHDLQLA GHMDRILRLE EGRLIAA
|
| |