Gene PA14_25020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25020 
Symbol 
ID4384438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2187619 
End bp2189541 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content66% 
IMG OID639324575 
ProductABC transporter ATP-binding protein 
Protein accessionYP_790153 
Protein GI116051020 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC TCAAGTTCAC CGATGTATCC CTTGCCTTTG GCACCACTCC CTTGCTGGAC 
AAGGTGTCGT GGCAGATCGG CCGTGGCGAG CGGGTCTGCG TGATCGGGCG CAACGGTACC
GGCAAGTCCA GCCTGTTCAA GGTGGTCAAG GGCGAACAGC AGGCCGACGA CGGCGAAGTC
TGGCGCGCAC CGGCGCTGAA GATCGGCGAA TTGCCCCAGG AACTGCCGCG TGCCGACGAA
CGGACAGTGT TCGACGTGGT GGCCGAGGGT CTGGCGGAAG TCGGCAAGCT GCTCGCCGAG
TACCACCACC TGAGCCAGAA CATCCATACC GACGATGACC TGGCGCGCCT CTCGCGGGTC
CAGCAGGAAC TCGAGGCGCG CGATGGCTGG CGCCTGCAGC AACTGGTGGA CAGCACCCTC
AGCCGCCTGC AGTTGCCGGC CGACAAGACC CTCGCCGAAC TCTCCGGCGG CTGGCGTCGG
CGCGTGCTGC TGGCCCAGGC GCTGGTCGCC GAGCCGGACC TGCTGCTGCT CGACGAACCG
ACCAACCACC TGGACATCGG CGCCATCGCC TGGCTCGAGG AAGCGCTGCT GGGCTTCAAC
GGCGCGGTGC TGTTCATTAC CCACGACCGC GCCTTCCTGC AATCCCTGGC GACCCGCATC
CTCGAGCTGG ATCGTGGCCA CCTGATCGAC TGGAACGGCG ATTACGCCAG TTTCCTGGTG
CACAAGGAAC AGCAACTGGC CGCCGAAGAA GCTGCCAACG CATTGTTCGA CAAGCGCCTG
GCCCAGGAAG AAGTGTGGAT CCGCCAGGGC ATCAAGGCCC GCCGCACGCG CAACGAAGGG
CGGGTTCGGG CACTGAAGGA AATGCGTCGC GAACGCGCCG AGCGCCGCGA GCGCCAGGGC
AAGGCCAGCT TCCAGCTGGA AAGCGCGGAC AAGTCCGGCA AGCAGGTGAT CGTGGTGGAG
CACGTCAGCT TCGCCCATCC CGGCGGCCAG CCGCTGGTAC GCGACTTCTC CATGGTCCTG
CAGCGCGGCG ACCGTATCGG CCTGCTCGGC GCCAACGGTA CCGGCAAGAC CACCTTGCTC
AAGCTGCTGC TTGGCGACCT GCAGCCGACC TCGGGCAAGA TCGAGGTGGG CACCAAGCTG
GAAGTGGCCT ACTTCGACCA GTTGCGCCAT CAGCTCGAAC CCGAGCAGAC GGTGATCGAC
AATATCTCCG AAGGCCGCGA GTTCATCACC ATCGACGGCC AGAACCGGCA TGTGCTCAGC
TATCTCGGCG ACTTCCTGTT CAGTCCGCAG CGCGCCCGCA CCCCGGTGAA GGCGTTGTCC
GGCGGCGAGC GCGCGCGCCT GTTGCTGGCC AAGCTGTTCA GCAAGCCGGC CAACCTGCTG
GTGCTCGACG AACCGACCAA CGACCTCGAC GTGGAAACCC TGGAACTGCT GGAGGAAGTC
CTGCTCGGCT TCCAGGGCAC CGTGCTGATG GTCAGCCACG ATCGGGCCTT CCTCGACAAC
GTGGTGACCA GCACCCTGGT CTTCGAGGGC GAGGGCAAGG TTCGCGAATT CGTCGGTGGC
TACCAGGACT GGCTGCGCCA AGGGGGCACG CCGCGCCTGC TCGGCGTGAG CGAGTCGAAG
AGCGGCAAGG CCGAGCTGAA TACCGCGCTG GCGCCCGCCG CCGAACCCGC GCCGGCTGCT
GCGGCGCCGA GCGAGGCGCC GGCGAAGAAA AAGCTCAGCT ACAAGTTGCA GCGCGAGCTG
GAGGCTTTGC CCGGGCAGAT CGACGCGGTC GAGGCGGAGC TGGCGGGTGT CCAGGAAACC
ATCGCGGAGC AGGATTTCTA TCTGCGCCCG CAGGACGAGC AGCGCGAAAC CCTGGCGCGG
CTGGACGCGT TGCAGCAGGA ACTCGATGCC TTGCTCGAGC GCTGGGCCGA ACTGGAAGAC
TGA
 
Protein sequence
MTLLKFTDVS LAFGTTPLLD KVSWQIGRGE RVCVIGRNGT GKSSLFKVVK GEQQADDGEV 
WRAPALKIGE LPQELPRADE RTVFDVVAEG LAEVGKLLAE YHHLSQNIHT DDDLARLSRV
QQELEARDGW RLQQLVDSTL SRLQLPADKT LAELSGGWRR RVLLAQALVA EPDLLLLDEP
TNHLDIGAIA WLEEALLGFN GAVLFITHDR AFLQSLATRI LELDRGHLID WNGDYASFLV
HKEQQLAAEE AANALFDKRL AQEEVWIRQG IKARRTRNEG RVRALKEMRR ERAERRERQG
KASFQLESAD KSGKQVIVVE HVSFAHPGGQ PLVRDFSMVL QRGDRIGLLG ANGTGKTTLL
KLLLGDLQPT SGKIEVGTKL EVAYFDQLRH QLEPEQTVID NISEGREFIT IDGQNRHVLS
YLGDFLFSPQ RARTPVKALS GGERARLLLA KLFSKPANLL VLDEPTNDLD VETLELLEEV
LLGFQGTVLM VSHDRAFLDN VVTSTLVFEG EGKVREFVGG YQDWLRQGGT PRLLGVSESK
SGKAELNTAL APAAEPAPAA AAPSEAPAKK KLSYKLQREL EALPGQIDAV EAELAGVQET
IAEQDFYLRP QDEQRETLAR LDALQQELDA LLERWAELED