Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_25020 |
Symbol | |
ID | 4384438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2187619 |
End bp | 2189541 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639324575 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_790153 |
Protein GI | 116051020 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTGC TCAAGTTCAC CGATGTATCC CTTGCCTTTG GCACCACTCC CTTGCTGGAC AAGGTGTCGT GGCAGATCGG CCGTGGCGAG CGGGTCTGCG TGATCGGGCG CAACGGTACC GGCAAGTCCA GCCTGTTCAA GGTGGTCAAG GGCGAACAGC AGGCCGACGA CGGCGAAGTC TGGCGCGCAC CGGCGCTGAA GATCGGCGAA TTGCCCCAGG AACTGCCGCG TGCCGACGAA CGGACAGTGT TCGACGTGGT GGCCGAGGGT CTGGCGGAAG TCGGCAAGCT GCTCGCCGAG TACCACCACC TGAGCCAGAA CATCCATACC GACGATGACC TGGCGCGCCT CTCGCGGGTC CAGCAGGAAC TCGAGGCGCG CGATGGCTGG CGCCTGCAGC AACTGGTGGA CAGCACCCTC AGCCGCCTGC AGTTGCCGGC CGACAAGACC CTCGCCGAAC TCTCCGGCGG CTGGCGTCGG CGCGTGCTGC TGGCCCAGGC GCTGGTCGCC GAGCCGGACC TGCTGCTGCT CGACGAACCG ACCAACCACC TGGACATCGG CGCCATCGCC TGGCTCGAGG AAGCGCTGCT GGGCTTCAAC GGCGCGGTGC TGTTCATTAC CCACGACCGC GCCTTCCTGC AATCCCTGGC GACCCGCATC CTCGAGCTGG ATCGTGGCCA CCTGATCGAC TGGAACGGCG ATTACGCCAG TTTCCTGGTG CACAAGGAAC AGCAACTGGC CGCCGAAGAA GCTGCCAACG CATTGTTCGA CAAGCGCCTG GCCCAGGAAG AAGTGTGGAT CCGCCAGGGC ATCAAGGCCC GCCGCACGCG CAACGAAGGG CGGGTTCGGG CACTGAAGGA AATGCGTCGC GAACGCGCCG AGCGCCGCGA GCGCCAGGGC AAGGCCAGCT TCCAGCTGGA AAGCGCGGAC AAGTCCGGCA AGCAGGTGAT CGTGGTGGAG CACGTCAGCT TCGCCCATCC CGGCGGCCAG CCGCTGGTAC GCGACTTCTC CATGGTCCTG CAGCGCGGCG ACCGTATCGG CCTGCTCGGC GCCAACGGTA CCGGCAAGAC CACCTTGCTC AAGCTGCTGC TTGGCGACCT GCAGCCGACC TCGGGCAAGA TCGAGGTGGG CACCAAGCTG GAAGTGGCCT ACTTCGACCA GTTGCGCCAT CAGCTCGAAC CCGAGCAGAC GGTGATCGAC AATATCTCCG AAGGCCGCGA GTTCATCACC ATCGACGGCC AGAACCGGCA TGTGCTCAGC TATCTCGGCG ACTTCCTGTT CAGTCCGCAG CGCGCCCGCA CCCCGGTGAA GGCGTTGTCC GGCGGCGAGC GCGCGCGCCT GTTGCTGGCC AAGCTGTTCA GCAAGCCGGC CAACCTGCTG GTGCTCGACG AACCGACCAA CGACCTCGAC GTGGAAACCC TGGAACTGCT GGAGGAAGTC CTGCTCGGCT TCCAGGGCAC CGTGCTGATG GTCAGCCACG ATCGGGCCTT CCTCGACAAC GTGGTGACCA GCACCCTGGT CTTCGAGGGC GAGGGCAAGG TTCGCGAATT CGTCGGTGGC TACCAGGACT GGCTGCGCCA AGGGGGCACG CCGCGCCTGC TCGGCGTGAG CGAGTCGAAG AGCGGCAAGG CCGAGCTGAA TACCGCGCTG GCGCCCGCCG CCGAACCCGC GCCGGCTGCT GCGGCGCCGA GCGAGGCGCC GGCGAAGAAA AAGCTCAGCT ACAAGTTGCA GCGCGAGCTG GAGGCTTTGC CCGGGCAGAT CGACGCGGTC GAGGCGGAGC TGGCGGGTGT CCAGGAAACC ATCGCGGAGC AGGATTTCTA TCTGCGCCCG CAGGACGAGC AGCGCGAAAC CCTGGCGCGG CTGGACGCGT TGCAGCAGGA ACTCGATGCC TTGCTCGAGC GCTGGGCCGA ACTGGAAGAC TGA
|
Protein sequence | MTLLKFTDVS LAFGTTPLLD KVSWQIGRGE RVCVIGRNGT GKSSLFKVVK GEQQADDGEV WRAPALKIGE LPQELPRADE RTVFDVVAEG LAEVGKLLAE YHHLSQNIHT DDDLARLSRV QQELEARDGW RLQQLVDSTL SRLQLPADKT LAELSGGWRR RVLLAQALVA EPDLLLLDEP TNHLDIGAIA WLEEALLGFN GAVLFITHDR AFLQSLATRI LELDRGHLID WNGDYASFLV HKEQQLAAEE AANALFDKRL AQEEVWIRQG IKARRTRNEG RVRALKEMRR ERAERRERQG KASFQLESAD KSGKQVIVVE HVSFAHPGGQ PLVRDFSMVL QRGDRIGLLG ANGTGKTTLL KLLLGDLQPT SGKIEVGTKL EVAYFDQLRH QLEPEQTVID NISEGREFIT IDGQNRHVLS YLGDFLFSPQ RARTPVKALS GGERARLLLA KLFSKPANLL VLDEPTNDLD VETLELLEEV LLGFQGTVLM VSHDRAFLDN VVTSTLVFEG EGKVREFVGG YQDWLRQGGT PRLLGVSESK SGKAELNTAL APAAEPAPAA AAPSEAPAKK KLSYKLQREL EALPGQIDAV EAELAGVQET IAEQDFYLRP QDEQRETLAR LDALQQELDA LLERWAELED
|
| |