Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_24240 |
Symbol | |
ID | 4384117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2103194 |
End bp | 2104054 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324508 |
Product | hypothetical protein |
Protein accession | YP_790087 |
Protein GI | 116051082 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00172141 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGG TGCAGGTCCT GAAGTTTCCC CTGTCGGTCG ACCTGGCCGG CTTCGTCGGC CTGCTGCGGC GTCTGAACGT GCCGCACCGG GTCAGCGAGG AATCCGGCCA GCAGGTCCTC TGGGTGCCCG ACGAGCGGCT CGCCGAGCAG GTCCGCGAGT TGTACCGGCG TTATCCCGAA GGCGATCCGC AGGCGACCCT GGAGGCCGCG CCGCGACCGG CGGGGCAGGG GTTCGTCCGG CAACTGCGGA TGAGCCCGAT GACCGCCGCG GTGTTGCTGC TGACCTTCGT CGTCGCCGCC GTCACCTACC TTGGCGACAA CTTCGCGACG ATGCGCTGGC TGACCTTCCA GGACTTCCGT ATCCAGGGCC AGTACGCGCT GTTCACGCCG TTGGCCGAGA GCCTGGCGGC GGGTCAATGG TGGCGGCTGT TCACGCCGAT GCTGATCCAC TTCGGCTGGC TGCACCTGGC GATGAACGCC ATGTGGTTCT GGGAGCTGGG CCGGCGCATC GAATTCCGCC AGGGCGGCCC GATGCTGCTC GGCCTGACCC TGCTGTTCGG CCTGGCGTCC AACGTGGTGC AGTACGCGGT GAGCGGCGCC AGCCTGTTCG GCGGGTTGTC CGGGGTGCTC TATGGCCTGC TCGGGCACTG CTGGATCTTC CAGTACCTGG CGCCGAACCA GGCCTATCGC CTGCCCAGGG GCGTCGTGGC GATGATGCTG ATCTGGCTGC TGGTGTGCCT GTCCGGGGTG ATCGACCTGC TCGGTTTCGG CTCCATCGCC AACGGCGCGC ACGTTGGCGG GCTGCTGGTC GGTTGCCTCA GCGGTTTGCT GGGCGGCCTG CTGGCGCGGC GTCGCCGTTG A
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Protein sequence | MSAVQVLKFP LSVDLAGFVG LLRRLNVPHR VSEESGQQVL WVPDERLAEQ VRELYRRYPE GDPQATLEAA PRPAGQGFVR QLRMSPMTAA VLLLTFVVAA VTYLGDNFAT MRWLTFQDFR IQGQYALFTP LAESLAAGQW WRLFTPMLIH FGWLHLAMNA MWFWELGRRI EFRQGGPMLL GLTLLFGLAS NVVQYAVSGA SLFGGLSGVL YGLLGHCWIF QYLAPNQAYR LPRGVVAMML IWLLVCLSGV IDLLGFGSIA NGAHVGGLLV GCLSGLLGGL LARRRR
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