Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23850 |
Symbol | trpF |
ID | 4381113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2073825 |
End bp | 2074460 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324478 |
Product | N-(5'-phosphoribosyl)anthranilate isomerase |
Protein accession | YP_790060 |
Protein GI | 116051109 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.774847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCAGCCG TTCGCATCAA GATCTGCGGT ATCACCCGAG TCGAGGACGC CCTCGCCGCC GCCGCGGCGG GCGCCGATGC CATCGGCCTG GTGTTCTATG CGAAGAGCCC GCGGGCGGTG GATATCCATC GGGCGCGGGA GATCGTTCGT GCCCTGCCGC CGTTCGTGAC CAGCGTCGGC CTGTTCGTCA ACGCCAGCCG CTGCGAACTG GGCGAGATTC TCGATGCGGT GCCGCTGGAC CTGCTGCAAT TCCATGGCGA CGAGCGCGCC GAGGACTGCG AGGGACATCG GCGACCCTAC CTGAAAGCCC TGCGGATGAA GCCCGGCGAC GACATCGTCG GGCGCGCGGC GGCATATCCG GGAGCTGCCG GGATTCTCCT GGATACCTAT GTGGAAGGCG TGCCCGGCGG CACGGGGGCG GCGTTCGACT GGTCGCTGGT GCCGGCCGAC CTGGGCAAAC CCCTGGTGCT GGCCGGCGGT CTGACGCCGG ATAACGTCGG CAGGGCAGTC GAGCAGGTCA AGCCCTACGC GGTGGACGTC AGCGGTGGCG TCGAGGCGAG CAAGGGAATC AAGGATGCGG CGAGGGTCCG CGCGTTCGTG GACGCGGTGC GTTCGCGGCG CCGCGACGAG ACATGA
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Protein sequence | MPAVRIKICG ITRVEDALAA AAAGADAIGL VFYAKSPRAV DIHRAREIVR ALPPFVTSVG LFVNASRCEL GEILDAVPLD LLQFHGDERA EDCEGHRRPY LKALRMKPGD DIVGRAAAYP GAAGILLDTY VEGVPGGTGA AFDWSLVPAD LGKPLVLAGG LTPDNVGRAV EQVKPYAVDV SGGVEASKGI KDAARVRAFV DAVRSRRRDE T
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