| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23830 |
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| Symbol | fimV |
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| ID | 4381115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2070083 |
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| End bp | 2072857 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639324476 |
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| Product | pilus assembly protein |
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| Protein accession | YP_790058 |
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| Protein GI | 116051111 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0199592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.717366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGGC TTCGTACACT GGTTCGGGCA ATCGCGGCGG CCTCGGTCCT GACTTCCGGC
ATGGCGCATG GATTGGGACT GGGGGAAATC ACCCTGAAGT CGGCGTTGAA CCAACCGTTG
GATGCCGAGA TCGAGCTGCT CGAAGTTCGT GACCTGGGTT CGGGCGAGGT GATCCCGAGC
CTGGCGTCGC CGGAAGAGTT CAGCAAGGCG GGCGTCGATC GCCTGTACTA CCTCACCGAC
CTGAAGTTCA CGCCGGTGGT GAAGCCCAAC GGCAAGAGCG TCATTCGCGT GACCTCGTCG
AAGCCGGTGC AGGAGCCCTA CCTGAACTTC CTGGTCCAGG TGCTCTGGCC GAACGGCCGC
CTGCTGCGCG AGTACACCGT CCTGCTGGAT CCGCCGCTGT ACTCCCCGCA GGCCGCGGCA
AGCGCTCCGC AAGCGCCGGT CAGCGCGCCG CGCGCGACCG GCGCCCCGCG AACCCCGCAG
GCGCCGGCTC CGGTGCGTAC CACCGCGCCG GCAGGCAGCG ACACCTATCG CACCGTTTCC
AACGACACGC TCTGGGAGAT CGCCCAGCGC AACCGTACCG ATCGCGTTTC CGTACCCCAG
GCGATGCTCG CGTTCCAGGA ACTGAATCCG GGCGCCTTCG TCGATGGCAA CATCAACCGG
CTGAAGAGCG GCCAGGTCCT GCGCATTCCC ACCGAACAGC AGATGCTGGA GCGCTCGCCG
CGCGAGGCGC TGTCCCAGGT GCAGGCGCAG AACCAGAGCT GGCGCGGCAG CCGCAATCCG
GCCGCGGGCA CCGCTGGCGC CAGGCAGTTG GATGCGACCC AGCGCAATGC CGCCGGGTCG
GCGCCATCCA AGGTCGACGC CACGGACAAC CTGCGCCTGG TGTCTGGCGA GGGCAAGGCC
AGCAAGGGTG CCGACAAGGG CGGGAAGGGC GACAGCAAGG CGATCGCCGA TACCCTGGCG
GTGACCAAGG AAAGCCTCGA TAGCACTCGC CGCGAGAACG AAGAACTGCA GAGCCGCATG
CAGGATCTGC AGAGCCAGCT GGACAAGCTG CAGAAGTTGA TCCAGTTGAA GGACGCCCAG
TTGGCCAAGC TGCAAGGGCA GTTGGGCGCC GAAGGCCAGG GCGCAGCCCA GCCGAACGCA
GCCCTGCCGG ATGCGTCCCA GCCCAATGCA GCCGCGCAGG CGCCGGCTCA GCCCGGGACT
CCCGCTGCGG CAGCGCCGAC TCCTGCTCCG GCCGGAGAAG CACCCGCCGC TCCGGCGCAG
CCTCCGGTGG CGCCGCCGCC CGCGCCAGTT GCCGAGAAGC CTCCGGCACC TGCCGTTCCG
GCGCCCGCTC CGGTACAGGC GGCAGAACAG CCGGCACCGA GCTTCCTCGA CGAACTGCTG
GCCAACCCGC TGTGGTTGGC GGTGATCGGC GGTAGTGCAC TGCTGGCGTT GCTGGTGCTG
CTGATGATCC TGTCGCGGCG CAATGCGCAG AAAGAGAAGG AAGAAGCCCA GGCTTTCGCC
GCGGATGCCG GCGAGGAACA GGAGGATGCG CTGGACCTGG GAAAGGACGG CTTCGACGAC
CTGACCCTCG ACGAGCCTGA ACCGCAGGTC GCAGCCGCTG CGCCGCAGGT CGAGAAGACC
ACTGCGCAGA CTTCCGATGC GCTGGGCGAG GCCGACATCT ATATCGCCTA CGGGCGTTTC
AACCAGGCCG CCGAACTGTT GCAGAACGCC ATCTACGACG AGCCGCAGCG CACCGACCTG
CGCCTCAAGC TGATGGAAGT CTATGCCGAG ATGGGCGATC GCGAAGGTTT CGCTCGCCAG
GAAAACGAGC TGCGCGAAAT CGGCGGCGCA CAGCCGCAGG TCGAGCAGCT CAAGTCGCGC
TACCCGGCAA TGGTCGCGGT CGCCGCGGTT GCCGGCCTGG CCGGCGCCAA GCTGGCGCAG
GACGAGCTGG ATAGCTTCAG CCTCGACGAC CTGTCGCTCG ACGACAGCGG TCACGCGGCC
AAGCCGGATG CGGCAGGACA GGATCTCGAC GACGCCTTCG ACCTGAGCCT GGACGACCTG
GGCGGCGGCG ATCTTGGCAG CGACGACGTG CAGGCCGATC TCAAGTCCGA CAGCGGGGCG
CTGGACGACC TGACCCTGGA CAGCGATCTG GACCTGGCGG CCTCGACCGC GGCGGACAAG
CCTGTCGACG ATCTCGACTT CGGCCTGGAT TTCGCGGAGT TGGCAGAGAC TCCGAGCCAA
CCCAAGCATG ACGACCTGGG CGATTTCTCC CTGGATCTCG ATGCGCCGGA AGACAAGCTT
TCGGACGACG ACTTCCTGCT TTCGCTGAAC GACGAGGTGC CCGCCGCGGC GCCAGCCAAC
AACGAATTCA CCCTCGATAC CGAGGCTGCC GAAGAGCCGG CGTTGTCCCT GCCGGACGAC
TTCGACCTGT CGCTGGCCGA CGAGCCGACG GAGCCGGCCG CTCCGGAGAA GGGCGAGGAC
AGTTTCGCCG CCCAGTTGGA CGAGGTGAGT GCGCAGTTGG ACGAGTTGGC CAGCAACCTT
GACGAGCCGA AGAGCGCGGC GCCGAGTTTC TCCGCCGAGG ATGCAGCGGT CGCCTCCGCC
CTGGACGGAG ACGCCGACGA TGACTTCGAC TTCCTCTCCG GTGCCGACGA AGCGGCGACC
AAGCTGGATC TGGCTCGCGC CTACATCGAC ATGGGCGATA GCGAAGGCGC GCGCGATATC
CTCGACGAAG TCCTGGCCGA AGGTAACGAC AGCCAGCAGG CGGAAGCCCG CGAGTTGCTG
GAGCGCCTGG CCTGA
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| Protein sequence | MVRLRTLVRA IAAASVLTSG MAHGLGLGEI TLKSALNQPL DAEIELLEVR DLGSGEVIPS
LASPEEFSKA GVDRLYYLTD LKFTPVVKPN GKSVIRVTSS KPVQEPYLNF LVQVLWPNGR
LLREYTVLLD PPLYSPQAAA SAPQAPVSAP RATGAPRTPQ APAPVRTTAP AGSDTYRTVS
NDTLWEIAQR NRTDRVSVPQ AMLAFQELNP GAFVDGNINR LKSGQVLRIP TEQQMLERSP
REALSQVQAQ NQSWRGSRNP AAGTAGARQL DATQRNAAGS APSKVDATDN LRLVSGEGKA
SKGADKGGKG DSKAIADTLA VTKESLDSTR RENEELQSRM QDLQSQLDKL QKLIQLKDAQ
LAKLQGQLGA EGQGAAQPNA ALPDASQPNA AAQAPAQPGT PAAAAPTPAP AGEAPAAPAQ
PPVAPPPAPV AEKPPAPAVP APAPVQAAEQ PAPSFLDELL ANPLWLAVIG GSALLALLVL
LMILSRRNAQ KEKEEAQAFA ADAGEEQEDA LDLGKDGFDD LTLDEPEPQV AAAAPQVEKT
TAQTSDALGE ADIYIAYGRF NQAAELLQNA IYDEPQRTDL RLKLMEVYAE MGDREGFARQ
ENELREIGGA QPQVEQLKSR YPAMVAVAAV AGLAGAKLAQ DELDSFSLDD LSLDDSGHAA
KPDAAGQDLD DAFDLSLDDL GGGDLGSDDV QADLKSDSGA LDDLTLDSDL DLAASTAADK
PVDDLDFGLD FAELAETPSQ PKHDDLGDFS LDLDAPEDKL SDDDFLLSLN DEVPAAAPAN
NEFTLDTEAA EEPALSLPDD FDLSLADEPT EPAAPEKGED SFAAQLDEVS AQLDELASNL
DEPKSAAPSF SAEDAAVASA LDGDADDDFD FLSGADEAAT KLDLARAYID MGDSEGARDI
LDEVLAEGND SQQAEARELL ERLA
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