Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23650 |
Symbol | |
ID | 4381128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2057398 |
End bp | 2058144 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324463 |
Product | short chain dehydrogenase |
Protein accession | YP_790045 |
Protein GI | 116051124 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0188614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACG TCATGCTGAT CACCGGAGCC AGCCGCGGCA TCGGCGCCGC CACCGCTCTG CTCGCCGCCG AGCGCGGCTA TGCGGTCGTC CTCAACTATC TGCGCAACCG CGAGGCCGCC GAAGCGCTGC GCCAGCGCAT CGAGCGCCAG GGCGGCGAAG CCCTGGCGGT GGCGGCCGAC GTAGCCGAGG AAGGCGATGT CGAGCGGCTG TTCGCCGCCA TCGACGAACG TTTCGGCCGC CTCGACGTGC TGGTCAACAA CGCCGGCATG CTGGAAGCGC AGACGCGCCT GGAAAACATC GACGCGGCGC GCCTGCACAG GGTATTCGCG ACCAACGTGA CCGGCAGCTT CCTCTGCGCC CGCGAGGCGG TGAAGCGCCT GTCGACCCGC CACGGCGGGC ACGGCGGCAG CATCGTCAAC GTATCCTCGA TGGCCTCGCG GCTGGGATCG CCCAACGAAT ACATCGACTA TGCCGCCGCC AAGGGCGCCA TCGACAGCAT GACCATCGGG CTGGCCAGGG AAGTGGCGGC GGAGGGTATC CGGGTCAACG CGGTGCGGCC CGGACTGATC GATACCGAGA TCCACGCCAG CGGCGGCGAG CCCGGCCGTA TCGAACGCCT GAAGGGCGGC ATACCGCTAG GACGCGGCGG CACGGCGGAG GAAGTCGCGC GGGCGATTCT CTGGCTGGCG TCGGACGAAG CCAGCTACAG CACTGGCACC TTCATCGATG TCAGCGGCGG CCGCTAG
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Protein sequence | MRNVMLITGA SRGIGAATAL LAAERGYAVV LNYLRNREAA EALRQRIERQ GGEALAVAAD VAEEGDVERL FAAIDERFGR LDVLVNNAGM LEAQTRLENI DAARLHRVFA TNVTGSFLCA REAVKRLSTR HGGHGGSIVN VSSMASRLGS PNEYIDYAAA KGAIDSMTIG LAREVAAEGI RVNAVRPGLI DTEIHASGGE PGRIERLKGG IPLGRGGTAE EVARAILWLA SDEASYSTGT FIDVSGGR
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