Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23620 |
Symbol | kdgA |
ID | 4381131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2055247 |
End bp | 2055894 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324460 |
Product | putative aldolase |
Protein accession | YP_790042 |
Protein GI | 116051127 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0111848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATTGC CGCTGGATCG GGTCCTGCTG CAGGCCAGCC CGGTATTGCC GGTGCTGGTG ATCGAGGACG TGGCGCTGGC GCCCGACCTG GCGCGCGCGT TGTATGCGGG CGGCGTCACG GTGTTGGAAG TGACGCTGCG CACGCCGCAG GCGCTGGACG CGATCGCCGC CATCCATCGC GAGGTGCCCG AGGTCCTGCT GGGGGCGGGT ACCCTGATCC ACACCGAGCA GTTTCTCGAG GCACGCGACG CGGGCGCGCA GTTCGCCGTC AGCCCCGGAT GCACGCCGCG CCTTGCCGCC GCCGCGGAGG ATGCCGGCCT GCCATACCTG CCCGGGGTGA TGACGCCTTC GGAAGTGTTG CTGGCGCTGG AGTACGGTTA TCGCTCGCTG AAGCTGTTCC CGGCCGATGG CACTGCCAGC GTGAAAATGC TGAAAAGCCT GAAGGGGCCG TTCACCGGCA TCCGCTTCTG CCCGACCGGC GGCGTCAACC TGGACAACCT GCTGAATTTC CTCCGCCTGC CCAATGTCGC CTGTGTCGGC GGCACCTGGC TGGCGCCGCC GAGCTTGATC CGGGCGCGGG CCTGGGATCA GATCACACAA CTGGCCAGGG AAGCGCGCGA ACTGGCCGGC AGCCTGGAGC AGCATTGA
|
Protein sequence | MTLPLDRVLL QASPVLPVLV IEDVALAPDL ARALYAGGVT VLEVTLRTPQ ALDAIAAIHR EVPEVLLGAG TLIHTEQFLE ARDAGAQFAV SPGCTPRLAA AAEDAGLPYL PGVMTPSEVL LALEYGYRSL KLFPADGTAS VKMLKSLKGP FTGIRFCPTG GVNLDNLLNF LRLPNVACVG GTWLAPPSLI RARAWDQITQ LAREARELAG SLEQH
|
| |