| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23520 |
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| Symbol | |
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| ID | 4381137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2047744 |
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| End bp | 2049243 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639324452 |
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| Product | putative MFS transporter |
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| Protein accession | YP_790036 |
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| Protein GI | 116051133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0341451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAGCG CCATGCTCGG CGCATTCATG GCGGTGCTCG ACATCCAGAT CACCAACTCC
TCACTGAAGG ACATCCAGGG CGCGCTGGCG GCGACCCTCG AGGAAGGCTC GTGGATCTCC
ACCTCCTATC TGGTGGCGGA GATCATCATG ATCCCGATGA CCGCCTGGCT GGTGCAGCTG
CTCTCGGCAC GGCGCCTGGC GGTGATGATC TCGGTGGGCT TCCTGGTGTC CTCGCTGCTC
TGCTCGTTCG CCTGGAACCT GGAAAGCATG ATCGTGTTCC GCGCCATGCA GGGTTTCACC
GGCGGCGCGC TGATTCCGCT GGCGTTCACC CTGGCCCTGG TCAAGTTGCC GGAACACCAC
CGTCCGAAGG GCATGGCGCT GTTCGCCATC ACCGCCACCT TCGCGCCCTC CATCGGACCG
ACCCTGGGAG GCTGGCTGAC GGAAAACTTC GGCTGGGAAT ACATCTTCTA TATCAACGTG
CCGCCGGGCC TGTTGATGAT CGCCGGGCTG CTCTACGGCC TGGAGAAAAA GGCGCCGCAC
TGGGAACTGC TGAAGAGTAC CGACTACGCC GGCATCGTCA CCCTCGGCAT CGGCCTGGGC
TGCCTGCAGG TCTTCCTCGA GGAAGGTCAC CGCAAGGACT GGCTGGAGTC GCAACTGATC
GTCAGCCTCG GCAGCGTCGC CCTGTTCAGC CTGGTCCTGT TCGTCATCCT GCAACTGTCG
CGGCCGAACC CGCTGATCGA CCTGGGCATC CTGCGCAACC GCAACTTCGG CCTCGCGAGC
ATTTCCAGCA TCGGCCTGGG CATGGGTCTG TACGGCTCGA TCTACGTACT GCCGCTGTAC
CTGGCACAAA TCCAGGGCTA CAACGCCATG CAGATCGGCG AGGTGATCAT GTGGATGGGC
ATTCCCCAGC TGTTCCTGAT CCCGCTGGTC CCGAAGTTGA TGAAGCTGGT CTCGCCGCGC
CTGCTCTGCG CCGCCGGCTT CGGCCTGTTC GGCCTTGCCA GCTTCTTCTC CGGGGTGCTC
AACCCGGACT TCGCCGGACC GCAGTTCAAC CAGATCCAGC TACTGCGCGC CCTCGGCCAG
CCGATGATCA TGGTGACCAT TTCGCTGATC GCCACCGCCT ACCTGCAGCC ACAGGATGCC
GGCTCGGCCT CGAGCCTGTT CAACATCCTG CGCAACCTCG GCGGCGCCAT CGGCATCGCC
CTGCTCGCGA CCCTGCTCGA CAGTCGCGCC AAGGTGTACT TCGACTATCT GCGCGAAGCC
CTGGTGCCGA CCAACCCGCA GGTCGACGAA CGCCTCGCGC AACTCGCCGC GCAACTGGGC
AGCCAGCAGG CGGCGCTGGG CAAACTCAGC GAGATCACCC ACCAGCAGGC GATGATCATG
GCCTACAACG ATGCTTTCCA TGTCATCGGC ATGGTGCTCG CAGTGAGCAT GCTCGCGGTG
CTGCTGACCC GCTCGCTGCC GGCCGGCATC GGCACCCGCG CCGACGCCGG GGCTCACTGA
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| Protein sequence | MLSAMLGAFM AVLDIQITNS SLKDIQGALA ATLEEGSWIS TSYLVAEIIM IPMTAWLVQL
LSARRLAVMI SVGFLVSSLL CSFAWNLESM IVFRAMQGFT GGALIPLAFT LALVKLPEHH
RPKGMALFAI TATFAPSIGP TLGGWLTENF GWEYIFYINV PPGLLMIAGL LYGLEKKAPH
WELLKSTDYA GIVTLGIGLG CLQVFLEEGH RKDWLESQLI VSLGSVALFS LVLFVILQLS
RPNPLIDLGI LRNRNFGLAS ISSIGLGMGL YGSIYVLPLY LAQIQGYNAM QIGEVIMWMG
IPQLFLIPLV PKLMKLVSPR LLCAAGFGLF GLASFFSGVL NPDFAGPQFN QIQLLRALGQ
PMIMVTISLI ATAYLQPQDA GSASSLFNIL RNLGGAIGIA LLATLLDSRA KVYFDYLREA
LVPTNPQVDE RLAQLAAQLG SQQAALGKLS EITHQQAMIM AYNDAFHVIG MVLAVSMLAV
LLTRSLPAGI GTRADAGAH
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