Gene PA14_23090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23090 
Symbol 
ID4381174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2002349 
End bp2003011 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID639324414 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_789999 
Protein GI116051170 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00053012 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACAACC TTGAACAGAA GACCGCCCGC ATCGACACGC TGTGCCGGGA GGCGCGCATC 
CTCCCGGTGA TCACCATCGA CCGCGAGGCG GACATCCTGC CGATGGCCGA TGCCCTCGCC
GCCGGCGGCC TGACCGCCCT GGAGATCACC CTGCGCACGG CACACGGGCT GACCGCCATC
CGTCGCCTCA GCGAGGAGCG CCCGCACCTG CGCATCGGCG CCGGCACCGT GCTCGACCCG
CAGACCTTCG CCGCCGCGGA AAAGGCCGGG GCGAGCTTCG TGGTCACCCC GGGATGCACT
GACGAGTTGC TGCGCTTCGC CCTGGACAGC GAAGTCCCGC TGTTGCCCGG CGTGGCCAGC
GCTTCCGAGA TCATGCTCGC CTACCGCCAT GGCTACCGCC GCTTCAAGCT GTTTCCCGCC
GAGGTCAGCG GCGGCCCGGC GGCGCTGAAG GCGTTCTCGG GACCATTCCC CGATATCCGC
TTCTGCCCCA CCGGAGGCGT CAGCCTGAAC AATCTCGCCG ACTACCTGGC GGTACCCAAC
GTGATGTGCG TCGGCGGCAC CTGGATGCTG CCCAAGGCCG TGGTCGACCG CGGCGACTGG
GCCCAGGTCG AGCGCCTCAG CCGCGAAGCC CTGGAGCGCT TCGCCGAGCA CCGCAGACAC
TGA
 
Protein sequence
MHNLEQKTAR IDTLCREARI LPVITIDREA DILPMADALA AGGLTALEIT LRTAHGLTAI 
RRLSEERPHL RIGAGTVLDP QTFAAAEKAG ASFVVTPGCT DELLRFALDS EVPLLPGVAS
ASEIMLAYRH GYRRFKLFPA EVSGGPAALK AFSGPFPDIR FCPTGGVSLN NLADYLAVPN
VMCVGGTWML PKAVVDRGDW AQVERLSREA LERFAEHRRH