Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22490 |
Symbol | acpD |
ID | 4383128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1957217 |
End bp | 1957858 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639324365 |
Product | acyl carrier protein phosphodiesterase |
Protein accession | YP_789950 |
Protein GI | 116051219 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000089212 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0000070742 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCCGTG TCCTGGTTAT CGAGAGCAGT GCCCGCCAAC GGGGCTCGGT TTCCCGCCTG CTGACGGCGG AATTCATCTC CCACTGGAAA GCCGCGCATC CCGCTGATCG CTTCCAGGTC CGCGACCTGG CGCGCGAGCC GCTGCCGCAC CTCGATGAAT TATTGCTGGG AGCCTGGACC ACTCCCTGCG ATGGCCATAG CGCTGCGGAA AGGCGCGCCC TCGAGCGTTC CAATCGCCTG ACCGAGGAGT TGCGGATAGC GGACGTGCTG GTGCTGGCGG CGCCGATGTA CAACTTCGCC ATTCCCAGCA GCCTGAAGAG CTGGTTCGAC CATGTGCTGC GCGCCGGCCT GACCTTCCGT TACGCCGAGC AGGGGCCGGA AGGCCTGCTA CAGGGCAAGC GCGCCTTCGT TCTCACCGCC CGCGGCGGAA TCTACGCCGG CGGCGGTCTC GACCACCAGG AACCCTATCT GCGCCAGGTG CTGGGCTTCG TCGGCATCCA CGACGTCACC TTCATCCACG CGGAGGGCAT GAACATGGGC CCGGAGTTCC GTGAGAAAGG CCTGGCGCGA GCCCGCGAGC GGATGCTGCA GGCGCTGGAA ACGAACACTT CCCTTTGCGT CCCTCTGCCA ACGCTCCGGT GA
|
Protein sequence | MSRVLVIESS ARQRGSVSRL LTAEFISHWK AAHPADRFQV RDLAREPLPH LDELLLGAWT TPCDGHSAAE RRALERSNRL TEELRIADVL VLAAPMYNFA IPSSLKSWFD HVLRAGLTFR YAEQGPEGLL QGKRAFVLTA RGGIYAGGGL DHQEPYLRQV LGFVGIHDVT FIHAEGMNMG PEFREKGLAR ARERMLQALE TNTSLCVPLP TLR
|
| |