Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_21900 |
Symbol | |
ID | 4381253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1905418 |
End bp | 1905996 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324315 |
Product | HAD-superfamily hydrolase |
Protein accession | YP_789900 |
Protein GI | 116051268 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00000205565 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGAGTC TCGGCTGGGT CGACGAATCC TTCGTCCGCC GCGACGCCGA ACTGATGGAG CAGTACGCCG AAGGCAAGCT GTCCATGGAC CTGTACATGG ACTACACCCT GCAACCGCTG ATCGGTCGCA GCGTCGAGGA AGTCGAGCGG GAAGTGGAGG CCTACGTCGA GGAGGTCATC GAGCCGCTGA TCTACAGCGA CGCCTGCGCC TGCCTGGCGC GCCACCGCAG CGCCAACGAC CGGGTGCTGA TCGTCTCCGC ATCCGGGGTG CACCTGGTCA AGCCGATCGC GGCGCGGATC GGCGTCGACG AAGTCCTCGC CATCGATCTC GAAGTGCTCG ACGGACACTA CACCGGCCGC ACCCTCGGCA CCCTCACCTA TCGCGAAGGC AAGGTATTGC GTCTGCTCGA CCTGCTGGAA GGAGACGATC GCCAACTGGC CGACGCCTGG TTCTATTCGG ACTCGCGCAA CGACCTGCCG CTGCTGAAGC TGGTCGGCCA TCCGAACACG GTCAATCCGG ACCCGACCCT GCTCGCCTAC GCCAAGGAAA TGGGCTGGCC GGTCAACGCC TGGCGCTGA
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Protein sequence | MESLGWVDES FVRRDAELME QYAEGKLSMD LYMDYTLQPL IGRSVEEVER EVEAYVEEVI EPLIYSDACA CLARHRSAND RVLIVSASGV HLVKPIAARI GVDEVLAIDL EVLDGHYTGR TLGTLTYREG KVLRLLDLLE GDDRQLADAW FYSDSRNDLP LLKLVGHPNT VNPDPTLLAY AKEMGWPVNA WR
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