| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21050 |
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| Symbol | |
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| ID | 4385436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1819004 |
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| End bp | 1820782 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639324241 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_789828 |
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| Protein GI | 116051339 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC TCCTCGCCCT CCCCGACCTG CAGCCGGAAC GGCTGTTCGT GCAGTCCGGC
GACGTGCGCC TGGCGGTTCA TTGCTGGGGC GCGCCGGACA ACGACAAGCC GACGCTGCTG
ATGGTGCATG GCTACCCGGA CAACCACGAG ACCTGGCTGC CGCTGATCCG CCAACTGGCT
GGGCGCTACC GCATCGTCGC CTACGACGTG CGCGGCGCCG GCGCTTCGGA CAAGCCACGC
TGGAGCCGCG ACTACCACCT GCAACGGCTC AGCGAAGACC TGCAGGCGGT GATTCGCGCC
ACCAGCCCGG ATCGCCCGGT GCACCTGCTG GCCCATGACT GGGGCTCGAT CCAGACCTGG
GAAAGCGTCA CCGATCCGCA GTGCCGCCCG CTGATCGCGT CCTATACCTC GATCTCCGGG
CCCTGCCTGG ACCATGTCGG CTTCTGGATG CGCGAACACC TCAGGCAGCG CAGTCCGAAG
GCCCTGAAAG CGGTATTCGG CCAGTTGCTC CACTCCTGGT ACATCGCCTT CTTCCATACC
CCCGTCGTAC CCGAGCTGCT CTGGAGCGTC GGCCTGGCCC GGCTCTGGCC GCAGTTCTTG
AAGCGCGCCG AAGGCGTCCG CCATCCACAG GTCAACCCGA CCCAGGCCAG CGACGGCCGG
CACGGGGTCA AGCTGTACCG CGGCAACTTC ATCCGCAGCC TGTTCCGTCC GCGCAAGCGC
CACACCGAAG TGCCGGTGCA ACTGATCGTA CCGACCCGCG ACCGTTACGT CGGCGCCCAG
CTGTTCCAGC ACCTCAGCCT GTGGGCGCCA CGCCTGTGGC GGCGCGAGGC GAGCGTCGGC
CATTGGCAAC TGCTGGCCGA GCCGGAGCAA CTGGCCGGCT GGCTTGGCGA GTTCATCGAC
GCCCAGGAAA CCGGCGAGTC GCCGCCGGCC CTGCAACGCG CACAGGTCCG CCCCGACGCG
CGCTCGATGA GCGGCAAGCT GGTGGTGGTC ACCGGCGCCG GCGGCGGCAT CGGCCGTTCG
ACCCTGCTCA GCTTCGCCGA GCGCGGCGCC AGCCTGCTCG CCGCCGATCT CGACCTGGAA
GCCGCCGAAC GCAGCGCCGA ACTGGCCCGC GCCCTTGGCG CCACGGCCCA TGCCTACCAG
GTCGACGTCG GCGATACCCA GGCCATGGAG CGCTTCGCCG AGTGGGTCCG CGACACCCTC
GGAGTCCCGG ATGTGGTGGT CAGCAATGCC GGCATCGGCA TGGCCGGACC GATGCTCGAC
ACCTCGCCCG CGGAATGGGA GCGCCTGCTG CGGGTCAACC TGTGGAGCGT GATCGACGGC
TGCCGCCTGT TCGGCCGGCA GATGATCGCG GCGAACAAGC CGGGGCACCT GGTCAATGTC
GCCTCCGGCG TGGCCTTCGC GCCGTCGCGC AACTACCCCG CCTACGCCAC CAGCAAGGCC
GCGGTACTGA TGCTCAGCGA ATGCCTGCGG GCGGAACTGG CCGGACGTTC GATCGGAGTC
ACCGCGGTGT GCCCGGGCTT CGTCGATACC GGCATCGTCC AGGCCACCCG CTTCGTCGGC
ATGGACGCCG AACGCCAGGC GCGGCGCCAG GCGAAGATCC AGCGCTTCTA CAAGCGACGC
CGGCTCAGCC CGGACACCGT TGGGGAAAAG CTGGTGCGCG CCGTGGAGCG CAACAAGGCG
GTGGTCTCGG TGGGCAGCGA GGTGCACCTC GGCGCCCTGC AATGGCGCTT CGCGCCCTGG
GCCACGCGGT TTCTCGCGCG CTTCGACCTG ACTTCCTGA
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| Protein sequence | MNALLALPDL QPERLFVQSG DVRLAVHCWG APDNDKPTLL MVHGYPDNHE TWLPLIRQLA
GRYRIVAYDV RGAGASDKPR WSRDYHLQRL SEDLQAVIRA TSPDRPVHLL AHDWGSIQTW
ESVTDPQCRP LIASYTSISG PCLDHVGFWM REHLRQRSPK ALKAVFGQLL HSWYIAFFHT
PVVPELLWSV GLARLWPQFL KRAEGVRHPQ VNPTQASDGR HGVKLYRGNF IRSLFRPRKR
HTEVPVQLIV PTRDRYVGAQ LFQHLSLWAP RLWRREASVG HWQLLAEPEQ LAGWLGEFID
AQETGESPPA LQRAQVRPDA RSMSGKLVVV TGAGGGIGRS TLLSFAERGA SLLAADLDLE
AAERSAELAR ALGATAHAYQ VDVGDTQAME RFAEWVRDTL GVPDVVVSNA GIGMAGPMLD
TSPAEWERLL RVNLWSVIDG CRLFGRQMIA ANKPGHLVNV ASGVAFAPSR NYPAYATSKA
AVLMLSECLR AELAGRSIGV TAVCPGFVDT GIVQATRFVG MDAERQARRQ AKIQRFYKRR
RLSPDTVGEK LVRAVERNKA VVSVGSEVHL GALQWRFAPW ATRFLARFDL TS
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