| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_20580 |
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| Symbol | amiC |
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| ID | 4382277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1770873 |
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| End bp | 1772030 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639324201 |
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| Product | aliphatic amidase expression-regulating protein |
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| Protein accession | YP_789788 |
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| Protein GI | 116051379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0172164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.861433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCGC ACCAGGAGCG GCCGCTGATC GGCCTGCTGT TCTCCGAAAC CGGTGTCACC
GCCGATATCG AGCGCTCGCA GCGCTATGGC GCATTGCTCG CGGTCGAGCA ACTGAATCGC
GAGGGCGGCG TCGGCGGTCG CCCGATCGAA ACGCTGTCCC AGGACCCCGG CGGCGATCCG
GACCGCTATC GGCTGTGCGC CGAGGACTTC ATTCGCAACC GGGGGGTACG GTTCCTCGTG
GGCTGCTACA TGTCGCACAC GCGCAAGGCG GTGATGCCGG TGGTCGAGCG CGCCGACGCG
CTGCTCTGCT ACCCGACTCC CTACGAGGGC TTCGAGTATT CGCCGAACAT CGTCTACGGC
GGTCCGGCGC CGAACCAGAA CAGTGCGCCG CTGGCGGCGT ACCTGATTCG CCACTACGGC
GAGCGGGTGG TGTTCATCGG CTCGGACTAC ATCTATCCGC GGGAAAGCAA CCATGTGATG
CGCCACCTGT ACCGCCAGCA CGGCGGCACG GTGCTCGAGG AAATCTACAT TCCGCTGTAT
CCCTCCGACG ACGACGTGCA GCGCGCCGTC GAGCGCATCT ACCAGGCGCG CGCCGACGTG
GTCTTCTCCA CCGTGGTGGG CACCGGCACC GCCGAGCTGT ATCGCGCCAT CGCCCGTCGC
TACGGCGATG GCAGGCGGCC GCCGATCGCC AGCCTGACCA CCAGCGAGGC GGAGGTGGCG
AAGATGGAGA GCGACGTGGC GGAGGGGCAG GTGGTGGTCG CGCCGTACTT CTCCAGCATC
GACACGGCCG CCAGCCGCGC CTTCGTCCAG GCCTGCCATG GCTTCTTCCC GGAAAACGCG
ACCATCACCG CCTGGGCCGA GGCGGCCTAC TGGCAGACCT TGCTGCTTGG CCGCGCCGCG
CAGGCCGCAG GCAGTTGGCG AGTGGAAGAC GTGCAGCGGC ACCTGTACGA CATTTGCATC
GACGCGCCGC AGGGGCCGGT CCGGGTGGAG CGCCAGAACA ACCACAGCCG CCTGTCTTCG
CGCATCGCGG AAATCGATGC GCGCGGCGTG TTCCAGGTCC GCTGGCAGTC GCCCGAACCG
ATTCGCCCCG ATCCTTATGT CGTCGTGCAT AACCTCGACG ACTGGTCCGC CAGCATGGGC
GGGGGAGCGC TCCCATGA
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| Protein sequence | MGSHQERPLI GLLFSETGVT ADIERSQRYG ALLAVEQLNR EGGVGGRPIE TLSQDPGGDP
DRYRLCAEDF IRNRGVRFLV GCYMSHTRKA VMPVVERADA LLCYPTPYEG FEYSPNIVYG
GPAPNQNSAP LAAYLIRHYG ERVVFIGSDY IYPRESNHVM RHLYRQHGGT VLEEIYIPLY
PSDDDVQRAV ERIYQARADV VFSTVVGTGT AELYRAIARR YGDGRRPPIA SLTTSEAEVA
KMESDVAEGQ VVVAPYFSSI DTAASRAFVQ ACHGFFPENA TITAWAEAAY WQTLLLGRAA
QAAGSWRVED VQRHLYDICI DAPQGPVRVE RQNNHSRLSS RIAEIDARGV FQVRWQSPEP
IRPDPYVVVH NLDDWSASMG GGALP
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