Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_20370 |
Symbol | phnH |
ID | 4385760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1752255 |
End bp | 1752884 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639324182 |
Product | carbon-phosphorus lyase complex subunit |
Protein accession | YP_789770 |
Protein GI | 116051397 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3625] Uncharacterized enzyme of phosphonate metabolism |
TIGRFAM ID | [TIGR03292] phosphonate C-P lyase system protein PhnH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.481874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.778261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCG CTTCGCTTCC CAGCCCGGCG GATACCGCCG CGCTATTGCA ACCGGCGTTC CAGGACCCGG TCCTGGACGC CCAGCGGAGT TTCCGCGCGG CGCTCAAGGC CCTCGCCGAA CCGGGGCTGG TACGCAACCT CGACCGCGCA CCGGCGCTGG CCGCGTTGCA ACCGGCCAGC TACGCACTGT GCCTGAGCTT CCTCGACTCT GACACCCCGC TGTGGCTGGC GCCGGGTCTC GACAGCCCGA CGTTGCGCGC CAACCTGGCC TTCCATTGCG GCTGCCCGAT CGTCGCCGAG CGCGAGCAGG CGCTGTTCGC CTTGCTCGAC GAAGGCGAGC TGGACGACCT GAGCGGCTTC GACAGCGGCA GCGACCGTTA TCCGGACCAG TCCTGCACCC TGCTGATCCA GCTCGCCGGC CTCGATGGTG GCGACTCGCT GGAGTGGCGC GGACCGGGTA TCGCCGAGGT GCGCCAGGTG GCGTTGCCGG TGAGCGCCGG GTTCTGGGCG CAGCGCGCCG CACGCACCGA ATTCCCCAGG GGCCTGGATG CCTTCTTCGC CGCCGGCGAG CGCATCCTCG GCCTGCCACG CAGTACCCGG GTCAGCGAAC CCGTCGAGGA GGTGGCCTGA
|
Protein sequence | MTSASLPSPA DTAALLQPAF QDPVLDAQRS FRAALKALAE PGLVRNLDRA PALAALQPAS YALCLSFLDS DTPLWLAPGL DSPTLRANLA FHCGCPIVAE REQALFALLD EGELDDLSGF DSGSDRYPDQ SCTLLIQLAG LDGGDSLEWR GPGIAEVRQV ALPVSAGFWA QRAARTEFPR GLDAFFAAGE RILGLPRSTR VSEPVEEVA
|
| |