| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_19120 |
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| Symbol | rhlR |
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| ID | 4381442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1650990 |
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| End bp | 1651715 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639324082 |
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| Product | transcriptional regulator RhlR |
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| Protein accession | YP_789670 |
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| Protein GI | 116051496 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.420854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.170234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAATG ACGGAGGCTT TTTGCTGTGG TGGGACGGTT TGCGTAGCGA GATGCAGCCG
ATCCACGACA GCCAGGGCGT GTTCGCCGTC CTGGAAAAGG AAGTGCGGCG CCTGGGCTTC
GATTACTACG CCTATGGCGT GCGCCACACG ATTCCCTTCA CCCGGCCGAA GACCGAGGTC
CATGGCACCT ATCCCAAGGC CTGGCTGGAG CGATACCAGA TGCAGAACTA CGGGGCCGTG
GATCCGGCGA TCCTCAACGG CCTGCGCTCC TCGGAAATGG TGGTCTGGAG CGACAGCCTG
TTCGACCAGA GCCGGATGCT CTGGAACGAG GCTCGCGATT GGGGCCTCTG TGTCGGCGCG
ACCCTGCCGA TCCGCGCGCC GAACAATTTG CTCAGCGTGC TTTCCGTGGC GCGCGACCAG
CAGAACATCT CCAGCTTCGA GCGCGAGGAA ATCCGCCTGC GGCTGCGTTG CATGATCGAG
TTGCTGACCC AGAAGCTGAC CGACCTGGAG CATCCGATGC TGATGTCCAA CCCGGTCTGC
CTGAGCCATC GCGAACGCGA GATCCTGCAA TGGACCGCCG ACGGCAAGAG TTCCGGGGAA
ATCGCCATCA TCCTGAGCAT CTCCGAGAGC ACGGTGAACT TCCACCACAA GAACATCCAG
AAGAAGTTCG ACGCGCCGAA CAAGACGCTG GCTGCCGCCT ACGCCGCGGC GCTGGGCCTC
ATCTGA
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| Protein sequence | MRNDGGFLLW WDGLRSEMQP IHDSQGVFAV LEKEVRRLGF DYYAYGVRHT IPFTRPKTEV
HGTYPKAWLE RYQMQNYGAV DPAILNGLRS SEMVVWSDSL FDQSRMLWNE ARDWGLCVGA
TLPIRAPNNL LSVLSVARDQ QNISSFEREE IRLRLRCMIE LLTQKLTDLE HPMLMSNPVC
LSHREREILQ WTADGKSSGE IAIILSISES TVNFHHKNIQ KKFDAPNKTL AAAYAAALGL
I
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