Gene PA14_18140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_18140 
SymbolmmsB 
ID4381532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1556038 
End bp1556934 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID639324008 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_789596 
Protein GI116051566 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCGCATTCCT CGGCCTGGGC AACATGGGTG GGCCGATGGC CGCCAACCTG 
CTCAAGGCTG GCCACCGGGT GAATGTCTTC GACTTGCAGC CCAAGGCCGT GCTGAGCCTG
GTCGAGCAGG GCGCGCAGGG CGCCGATAGC GCCTTGCAGT GCTGCGAAGG CGCCGAAGTG
GTGATCAGCA TGCTGCCGGC CGGGCAGCAC GTGGAAAGCC TGTATCTCGG CGCCGACGGC
CTGCTCGCGC GGGTCGCCGG CAAGCCCCTA CTGATCGACT GCTCGACCAT TGCCCCGGAG
ACCGCGCGCA AGGTCGCCGA GGCCGCCGCG GCGAAGGGCC TGACCCTGCT CGACGCGCCG
GTTTCCGGCG GCGTCGGCGG CGCCCGCGCC GGCACCCTGA GCTTCATCGT CGGCGGCCCC
GCCGAAGGCT TCGCGCGGGC CCGGCCGATC CTCGAGAACA TGGGCCGGAA CATCTTCCAC
GCCGGCGATC ACGGCGCCGG CCAGGTGGCG AAGATCTGCA ACAACATGCT CCTCGGCATC
CTCATGGCCG GCACCGCCGA GGCCCTGGCG CTGGGGGTGA AGAACGGCCT CGATCCGGCG
GTGCTGTCCG AGGTGATGAA GCAGAGTTCC GGCGGCAACT GGGCGCTGAA CCTCTACAAC
CCCTGGCCCG GGGTGATGCC GCAGGCGCCG GCGAGCAACG GCTATGCCGG CGGTTTCCAG
GTGCGCCTGA TGAACAAGGA CCTCGGCCTG GCGCTGGCCA ACGCCCAGGC GGTGCAGGCC
TCGACGCCAC TCGGCGCGCT GGCGCGCAAC CTGTTCAGCT TGCACGCCCA GGCCGATGCC
GAGCACGACG GGCTGGACTT CTCCAGCATC CAGAAGCTCT ACCGCGGCAA GGACTGA
 
Protein sequence
MTDIAFLGLG NMGGPMAANL LKAGHRVNVF DLQPKAVLSL VEQGAQGADS ALQCCEGAEV 
VISMLPAGQH VESLYLGADG LLARVAGKPL LIDCSTIAPE TARKVAEAAA AKGLTLLDAP
VSGGVGGARA GTLSFIVGGP AEGFARARPI LENMGRNIFH AGDHGAGQVA KICNNMLLGI
LMAGTAEALA LGVKNGLDPA VLSEVMKQSS GGNWALNLYN PWPGVMPQAP ASNGYAGGFQ
VRLMNKDLGL ALANAQAVQA STPLGALARN LFSLHAQADA EHDGLDFSSI QKLYRGKD