| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_17960 |
|---|
| Symbol | glpK |
|---|
| ID | 4381546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1542808 |
|---|
| End bp | 1544325 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639323994 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_789582 |
|---|
| Protein GI | 116051580 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.155837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AGCACAACAA GAAATACGTC GTCGCCCTGG ACCAGGGCAC CACCAGCTCC
CGCGCCATCG TCTTCGACCG CGATGCCAAC GTGGTCAGCC AGGCCCAGCG CGAGTTCGCC
CAGTTCTATC CGCAGGCCGG CTGGGTCGAA CACGATCCGA TGGAAATCTG GGCCACGCAG
AGTTCGACCC TGGTCGAGGC CCTCGCCCAA GCCAGCATCG AGCACGACCA GGTGGCCGCC
ATCGGCATCA CCAACCAGCG CGAGACCACG GTGGTCTGGG ACCGTCACAG CGGTCGGCCG
ATCCACAACG CCATCGTCTG GCAGTGCCGG CGCAGCGCGG CGATCTGCGC GCAGCTCAAG
CGCGACGGGC TGGAAGACTA CATCCGCGAA ACCACCGGTC TGGTCACCGA CCCGTACTTT
TCCGGGACCA AGCTGAAGTG GATCCTCGAC AACGTCGAAG GCGCCCGCGA ACGCGCGCGC
AACGGCGACC TGTTGTTCGG CACCATCGAC ACCTGGCTGA TCTGGAAGCT CACCGAAGGC
AAGGTCCACG TCACCGACTA CACCAATGCC TCGCGGACCA TGCTGTTCAA CATCCACAGC
CTCGACTGGG ACGCACGGAT GCTCGAGGTG CTCGACATTC CCCGCTCGAT GCTGCCCGAG
GTGCGCAACT CTTCGGAGGT CTACGGCAAC GCCCGGATCG GCGGGGTCGG CGGCGGCGAG
CTGCCGATCG CCGGGATCGC CGGCGACCAG CAGGCCGCCC TGTTCGGCCA GATGTGCGTG
GAACCGGGCC AGGCGAAGAA CACCTACGGC ACCGGCTGCT TCCTGCTGAT GCACACCGGC
GACAAGGCGG TGAAGTCCAC CCATGGCCTG CTCACCACCA TCGCCTGCGG CCCGCGCGGC
GAGGTCGGCT ACGCCCTGGA GGGCGCGGTG TTCAACGGCG GCTCCACGGT GCAGTGGTTG
CGCGACGAAC TGAAGGTGAT CAACGACTCC TTCGATTCCG AATACTTCGC CACCAAGGTC
AAGGACAGCA ACGGCGTCTA CCTGGTACCG GCCTTCACCG GACTCGGCGC GCCCTATTGG
GACCCCTATG CGCGCGGCGC AGTGTTCGGC CTGACCCGTG GAGTCAAGGC CGACCACCTG
ATCCGCGCCA CCCTGGAATC CATCGCCTAC CAGACCCGCG ACGTGCTCGA CGCCATGCAG
CGCGATGCCG GCGAACGCCT GCGCGCTCTG CGCGTCGACG GCGGGGCGGT GGCCAACAAC
TTCCTCATGC AGTTCCAGGC CGACATCCTC GGCACCCGCG TGGAGCGCCC GGTGATGCGC
GAGACCACCG CCCTCGGCGC CGCCTACCTG GCCGGCCTGG CCTGCGGCTT CTGGAGCAGC
CTCGACGAGC TGAAGAGCAA GGCGGTGATC GAGCGGGTGT TCGAGCCGGA GTGCGACGAG
CCCCGGCGCG AAAAGCTCTA TGCCGGCTGG AAAAAAGCGG TGGAGCGCAC TCGCGGCTGG
GACGACGGCG AACTGTGA
|
|---|
| Protein sequence | MTDKHNKKYV VALDQGTTSS RAIVFDRDAN VVSQAQREFA QFYPQAGWVE HDPMEIWATQ
SSTLVEALAQ ASIEHDQVAA IGITNQRETT VVWDRHSGRP IHNAIVWQCR RSAAICAQLK
RDGLEDYIRE TTGLVTDPYF SGTKLKWILD NVEGARERAR NGDLLFGTID TWLIWKLTEG
KVHVTDYTNA SRTMLFNIHS LDWDARMLEV LDIPRSMLPE VRNSSEVYGN ARIGGVGGGE
LPIAGIAGDQ QAALFGQMCV EPGQAKNTYG TGCFLLMHTG DKAVKSTHGL LTTIACGPRG
EVGYALEGAV FNGGSTVQWL RDELKVINDS FDSEYFATKV KDSNGVYLVP AFTGLGAPYW
DPYARGAVFG LTRGVKADHL IRATLESIAY QTRDVLDAMQ RDAGERLRAL RVDGGAVANN
FLMQFQADIL GTRVERPVMR ETTALGAAYL AGLACGFWSS LDELKSKAVI ERVFEPECDE
PRREKLYAGW KKAVERTRGW DDGEL
|
|---|
| |