Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_17860 |
Symbol | |
ID | 4381554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1533277 |
End bp | 1534809 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639323986 |
Product | 3-hydroxy-acyl-CoA dehydrogenase |
Protein accession | YP_789574 |
Protein GI | 116051588 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.864286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC CATCGATCGT TCTCATCGGT ATCGTCGGTA CCGGTGCCAT GGGCCAGGGC ATCGCCCAGC TCGCTGCCTG TGCCGGGCTG TCGGTGCTGC TCTACGACAG CCGCCAGGGG GCGGCGCTGC AAGCGCGCGA GCAGATCGCC ACGGTCCTTG CCCGGCAGGT GGAGCGGGGC CGGCTGGAGG CGGAGGCTGT CGAGCGCGCG ATGGGCAATC TGCGGGTGGT CGAGGACTTG CGGGTCCTAC GCGGCTGCCA GTTGGTGATC GAGGCGATCG TCGAGAACCT GGAGGCCAAG CAGGCGTTGT TCCGCCAATT GGAAGAGGTG GTCGGCGACG AAGCGATCCT CGCCAGCAAT ACCTCCTCGC TGTCGGTTAC CGCGATCGCC TCGGCCTGTC GCGATCCCGG CCGGGTCGCC GGTCTGCACT TCTTCAATCC GGTGCCGCTG ATGCGTCTGG TGGAGGTGAT CGACGGTCTC GCCACCCGCA CCGGCATCGC CGAGCGACTG TGCGCCCTGG TGGCGACCTT CGGCCACCAG GCGGTGCGTG CCACGGACAG CCCCGGCTTC ATCGTCAACC ATGCCGGACG GGCCTTCGGC ACCGAGGCGC TGCGTATCCT CGGCGAGGGC GTGGCGCCGG TGGCGGCGAT CGACGAAGTC CTGCGCGAGG GCGCCGGCTT CCGCATGGGC CCGTTCGAGC TGTTCGACCT GGTCGGGTTG GACGTCAGCC TGCCGGTGAT GGAGTCGATC TACCGGCAGT ACTACGAGGA GCCGCGTTAT CGTCCGCATC CCTTGCTGCG CCAGATGCTC GCCGCCGGCC GCCTGGGGCG CAAGAGCGGC CAGGGCTTCT ACCGCTACGA CGGCGCTGGG CAGGTGCCCG CCGCCGCCCC GGCGGTTGCG CCAGGCGCGG CGTTGCCGCC GGTGTGGCTG GGCGTCGACG ACGAACATGA CCGCGCGCCA TTGCTGACGT TGCTACAACG TCTGGGCGCC GAGGTGGAGA GTGGCGAGCG TCCTTCCGGG GCGGCGTTGT GCCTGCTTGC GCCGCTGGGC GCCGACGTCA GCGCCGCAGC GCGGCGGTTC GCCGTCGATC CGACGCGCAG CCTGGCCATC GACGTGCTGT CGGACCTGGA GCGACACCGC TGCCTGATGG CCTGCCCGGC GACCCGAGCG GAGCTGCAGC AGGCCGCTCG CACCCTGTTC GCACGGGACG GCGTGGGCGT CACGCTGATT CGCGACAGCG CCGGGTTCAT CGTCCAGCGC ACCCTCGCCT CGATCGTCAA TCTCGCCTGC GACATCGCCC AGCAGGGTAT CGCTTCGGTG GAGCACATCG ACCTGGCGGT GCGCCTCGGT CTCGGCTATC CGCTGGGGCC GCTGGAGTGG GGCGACCGAC TGGGCGCCGG GCGCGTGCTG CGCATCCTCG AACGCCTGCA TGCGCTCAGC GGCGACCCGC GCTATCGCCC CAGTCCCTGG CTGCGCCGGC GCGCCCAACT GGGCCTTTCC CTGCGCCAGC CGGACAGCCC GTTGGCCTCC TGA
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Protein sequence | MSEPSIVLIG IVGTGAMGQG IAQLAACAGL SVLLYDSRQG AALQAREQIA TVLARQVERG RLEAEAVERA MGNLRVVEDL RVLRGCQLVI EAIVENLEAK QALFRQLEEV VGDEAILASN TSSLSVTAIA SACRDPGRVA GLHFFNPVPL MRLVEVIDGL ATRTGIAERL CALVATFGHQ AVRATDSPGF IVNHAGRAFG TEALRILGEG VAPVAAIDEV LREGAGFRMG PFELFDLVGL DVSLPVMESI YRQYYEEPRY RPHPLLRQML AAGRLGRKSG QGFYRYDGAG QVPAAAPAVA PGAALPPVWL GVDDEHDRAP LLTLLQRLGA EVESGERPSG AALCLLAPLG ADVSAAARRF AVDPTRSLAI DVLSDLERHR CLMACPATRA ELQQAARTLF ARDGVGVTLI RDSAGFIVQR TLASIVNLAC DIAQQGIASV EHIDLAVRLG LGYPLGPLEW GDRLGAGRVL RILERLHALS GDPRYRPSPW LRRRAQLGLS LRQPDSPLAS
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