Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_17630 |
Symbol | potB |
ID | 4381571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1514941 |
End bp | 1515834 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323968 |
Product | polyamine transport protein PotB |
Protein accession | YP_789556 |
Protein GI | 116051605 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGA ACCTCGGCAA GTGGCTGCTG GTCTGGCCGC CGCAAGCGTA TCTGCTGTTC TTCTTCCTGG TTCCGGCGCT GATCATGCTG TTCGCCTCGT TCCGCTTTCC CGGCGACTAC GGCGGCCTGG CGCCCTGGAT GTACAGCGAG GACGGGCAGA CCGTCTACGA CCTCAGCGTG GAGAACTACA CCCGGCTCAC CGAGAGCTGG GTGTACCTGC AACTGTTCGT CAAATCCTTC GGCTACGCCC TGGTCACCAC CCTGGCCTGC CTGCTGCTCG CCTACCCGGT GGCGACCACC CTCGCCCGGG CCCCGGCGAA GTGGCGCAAC CTGCTGATCC TGCTGGTGAT CCTGCCGTTC TGGAGCAACC TGCTGGTACG CGTCTACGCC TGGATGATCA TCCTCTCGCC GTCCGGTGCC CTGACCCGCG GGATCAACGC CGCGCTGGAC CTGTTCGGCG CGCAGCCGAT CAGCCTGATG TTCACCCCGT TCGCGGTGAT CCTGTGCATG GTCTACGTGC ACCTGCCGTT CATGATCCTG CCGCTCTACG CCAACCTGGA GAAACACGAC CCGGCCCTGC TGGACGCCGC CCAGGACCTC GGCGCCGGTC GTTGGCAACG CTTCTGGCGG GTGACCTTCC CGCTCTCGCT GCCGGGCGTG GCCGCCGGCG CGGCACTGGT ATTCATCCCG GTGCTGGGAA TGTTCGCCAT CCCCGACCTG GTCGGCGGTA CCGACGGCAT CATGATCGGC AACCTGATCA AGAGCCAGTT CCTCGACTCC CGCGACTGGC CGTTCGGCAG CGCGCTGTCG ATCGCCCTGA CCGGCTGCAT CCTGCTGCTG GTCGCCCTCG GCATGGGCGC CGCGCGCGCC CGCAAGGGAG GCGCCCATGC GTAG
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Protein sequence | MRKNLGKWLL VWPPQAYLLF FFLVPALIML FASFRFPGDY GGLAPWMYSE DGQTVYDLSV ENYTRLTESW VYLQLFVKSF GYALVTTLAC LLLAYPVATT LARAPAKWRN LLILLVILPF WSNLLVRVYA WMIILSPSGA LTRGINAALD LFGAQPISLM FTPFAVILCM VYVHLPFMIL PLYANLEKHD PALLDAAQDL GAGRWQRFWR VTFPLSLPGV AAGAALVFIP VLGMFAIPDL VGGTDGIMIG NLIKSQFLDS RDWPFGSALS IALTGCILLL VALGMGAARA RKGGAHA
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