Gene PA14_17630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_17630 
SymbolpotB 
ID4381571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1514941 
End bp1515834 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID639323968 
Productpolyamine transport protein PotB 
Protein accessionYP_789556 
Protein GI116051605 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGA ACCTCGGCAA GTGGCTGCTG GTCTGGCCGC CGCAAGCGTA TCTGCTGTTC 
TTCTTCCTGG TTCCGGCGCT GATCATGCTG TTCGCCTCGT TCCGCTTTCC CGGCGACTAC
GGCGGCCTGG CGCCCTGGAT GTACAGCGAG GACGGGCAGA CCGTCTACGA CCTCAGCGTG
GAGAACTACA CCCGGCTCAC CGAGAGCTGG GTGTACCTGC AACTGTTCGT CAAATCCTTC
GGCTACGCCC TGGTCACCAC CCTGGCCTGC CTGCTGCTCG CCTACCCGGT GGCGACCACC
CTCGCCCGGG CCCCGGCGAA GTGGCGCAAC CTGCTGATCC TGCTGGTGAT CCTGCCGTTC
TGGAGCAACC TGCTGGTACG CGTCTACGCC TGGATGATCA TCCTCTCGCC GTCCGGTGCC
CTGACCCGCG GGATCAACGC CGCGCTGGAC CTGTTCGGCG CGCAGCCGAT CAGCCTGATG
TTCACCCCGT TCGCGGTGAT CCTGTGCATG GTCTACGTGC ACCTGCCGTT CATGATCCTG
CCGCTCTACG CCAACCTGGA GAAACACGAC CCGGCCCTGC TGGACGCCGC CCAGGACCTC
GGCGCCGGTC GTTGGCAACG CTTCTGGCGG GTGACCTTCC CGCTCTCGCT GCCGGGCGTG
GCCGCCGGCG CGGCACTGGT ATTCATCCCG GTGCTGGGAA TGTTCGCCAT CCCCGACCTG
GTCGGCGGTA CCGACGGCAT CATGATCGGC AACCTGATCA AGAGCCAGTT CCTCGACTCC
CGCGACTGGC CGTTCGGCAG CGCGCTGTCG ATCGCCCTGA CCGGCTGCAT CCTGCTGCTG
GTCGCCCTCG GCATGGGCGC CGCGCGCGCC CGCAAGGGAG GCGCCCATGC GTAG
 
Protein sequence
MRKNLGKWLL VWPPQAYLLF FFLVPALIML FASFRFPGDY GGLAPWMYSE DGQTVYDLSV 
ENYTRLTESW VYLQLFVKSF GYALVTTLAC LLLAYPVATT LARAPAKWRN LLILLVILPF
WSNLLVRVYA WMIILSPSGA LTRGINAALD LFGAQPISLM FTPFAVILCM VYVHLPFMIL
PLYANLEKHD PALLDAAQDL GAGRWQRFWR VTFPLSLPGV AAGAALVFIP VLGMFAIPDL
VGGTDGIMIG NLIKSQFLDS RDWPFGSALS IALTGCILLL VALGMGAARA RKGGAHA