Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_17620 |
Symbol | potC |
ID | 4381572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1514178 |
End bp | 1514948 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639323967 |
Product | polyamine transport protein PotC |
Protein accession | YP_789555 |
Protein GI | 116051606 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGGC CCTACCTGCT CTGGAGCGCC ACCGCGCTGG TGTACCTGTT CCTCTACGTA CCGCTGGTGA TCGTGGTGCT GTACTCCTTC AACGACTCGC GGCTGAACGC CGAGTGGGTG GGCTTCACCC TGGACTGGTA CCGCAAGCTG TTCGGCAACC GCGACATGCT CCAGGCCGCC GCCAACTCGC TGGTCATCGC GCTGGTTTCG GCCAGCGTGG CGACCCTGCT CGGCACCCTC GCCGGGGTCG CCCTGCATCG CTTCAAGCTG CGCGTGCTGC CCCTGCTGGT GCTGACCCCA ATCGCCATTC CGGAACTCCT GATGGGAGTC TCGCTGGTGA TCTTCTTCAT CGGCCTGAAC ATGAGCCTGG GCATGCTCTC GGTGACCCTC GCGCACATCA CCTTCTCGGT CGGCTTCGTC GCCCTGGTGG TGCAGGCGCG CATGTCGGGC ATGGACGAAA GCCTCACCGA GGCGGCCCGC GACCTCGGTG CCACGCCCTG GCAGAGCTTC CGCCTGGTGA CCCTGCCGCT GATCATGCCG GGCATCGTCG CCGGCGCGCT GATGGCCTTC ACCCTGTCCA TCGACGACTT CGTGATCACC TTCTTCACCG CCGGCGGCGG CTTCGCCACC CTGCCGACGC AGATCTACAC CATGATCAAG ATCGCCGTGA CGCCCGAAGT GAACGCCGTC TCCACCCTGC TGATGCTGCT CACCCTGGTG CTGATCGTGA TCGCCTCGAA ACTCTCCCCC AGCGCCATCA AGGGCCATTG A
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Protein sequence | MRRPYLLWSA TALVYLFLYV PLVIVVLYSF NDSRLNAEWV GFTLDWYRKL FGNRDMLQAA ANSLVIALVS ASVATLLGTL AGVALHRFKL RVLPLLVLTP IAIPELLMGV SLVIFFIGLN MSLGMLSVTL AHITFSVGFV ALVVQARMSG MDESLTEAAR DLGATPWQSF RLVTLPLIMP GIVAGALMAF TLSIDDFVIT FFTAGGGFAT LPTQIYTMIK IAVTPEVNAV STLLMLLTLV LIVIASKLSP SAIKGH
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