Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_17140 |
Symbol | |
ID | 4383262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1469141 |
End bp | 1470493 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639323927 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_789515 |
Protein GI | 116051646 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGC TTTACATGAT CGTCGGTACC CTGGTGGCCC TGGGCGTGCT GGTGACGTTC CACGAATTCG GCCACTTCTG GGTCGCGCGA CGCTGCGGGG TGAAGGTCCT GCGCTTCTCC GTCGGCTTCG GCACGCCGCT GGTGCGCTGG CACGACCGGC ACGGCACCGA GTTCGTGGTG GCGGCCATTC CGCTGGGCGG CTACGTCAAG ATGCTCGACG AGCGCGAGGC GGAAGTACCG GCCCATCTGC TCGAACAGTC CTTCAATCGC AAGACGGTCC GTCAGCGGAT CGCCATCGTC GCGGCTGGTC CCATCGCCAA TTTCCTACTG GCGATTCTGT TCTTCTGGGT CGTCGCCCTG CTCGGTAGCC AGCAGGTGCG CCCGGTCATC GGTTCCGTGG CGCCGGAGAG CCTGGCCGCC CAGGCCGGCC TGGAGGCCGG GCAGGAACTG CTGGCGGTGG ACGGCGAGCC CGTCACCGGC TGGAGCGGGG TCAACCTGCA GCTGGTTCGC CGTCTCGGCG AGAGCGGTAC GCTGGAAGTG CGGGTGCAGG AAAAGGGCTC GAATGTTGAT TCCACCCACC AGGTGCGTCT GGATGGCTGG CTGAAGGGCG AGGACAATCC CGATCCCATC GCCTCGCTGG GCATCCGGCC CTGGCGGCCG GCCTTGCCGC CGGTGCTGGC CGAACTCGAC CCCAAGGGGC CGGCGCAGGC CGCCGGGCTG AAGCTCGGCG ACCGCTTGCA GAGCATCGAT GGCATCGCCG TCGACGACTG GCAGCAGGTG GTGGAAAGCG TCCGTGCCCG TCCCGGGCAG CGCGTCCAGC TCAAGGTACT GCGCGACGGC GAAGTGCTGG ATGTTGCCCT GGAGCTGGCG GTGCGCGGCG AGGGCAAGGC CCGGAGCGGC TACATGGGGG CGGGGGTCGC CGGTACCGAA TGGCCGGCGG AAATGCTCCG CGAAGTGAGC TACGGACCGC TGGAGGCGGT GGGTCAGGCG CTTTCCCGAA CCTGGACCAT GAGCCTGCTA ACGCTCGACT CCATAAAGAA AATGTTGCTC GGCGAGCTCT CGGTAAAAAA CTTGAGCGGG CCGATAACCA TTGCTAAAGT GGCGGGCGCT TCAGCCCAGT CTGGCGTGGG GGATTTTCTC AATTTCCTGG CCTATCTGAG CATTAGCTTG GGGGTTCTCA ACCTGCTGCC GATCCCTGTC CTCGATGGCG GGCATCTGCT GTTCTATCTG GTTGAGTGGG TGCGCGGGCG CCCATTATCC GAACGGGTAC AGGCTTGGGG GATGCAGATC GGCATCAGTC TGGTCGTTGG CGTGATGTTG CTCGCTCTGG TCAACGATCT GAGTCGTCTG TAG
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Protein sequence | MSALYMIVGT LVALGVLVTF HEFGHFWVAR RCGVKVLRFS VGFGTPLVRW HDRHGTEFVV AAIPLGGYVK MLDEREAEVP AHLLEQSFNR KTVRQRIAIV AAGPIANFLL AILFFWVVAL LGSQQVRPVI GSVAPESLAA QAGLEAGQEL LAVDGEPVTG WSGVNLQLVR RLGESGTLEV RVQEKGSNVD STHQVRLDGW LKGEDNPDPI ASLGIRPWRP ALPPVLAELD PKGPAQAAGL KLGDRLQSID GIAVDDWQQV VESVRARPGQ RVQLKVLRDG EVLDVALELA VRGEGKARSG YMGAGVAGTE WPAEMLREVS YGPLEAVGQA LSRTWTMSLL TLDSIKKMLL GELSVKNLSG PITIAKVAGA SAQSGVGDFL NFLAYLSISL GVLNLLPIPV LDGGHLLFYL VEWVRGRPLS ERVQAWGMQI GISLVVGVML LALVNDLSRL
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