Gene PA14_16790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16790 
Symbol 
ID4381602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1436911 
End bp1437549 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID639323898 
ProductTetR family transcriptional regulator 
Protein accessionYP_789486 
Protein GI116051675 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.297454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC CCACCTCCTC CGTCGGTCCC GGCCGGCCCA AGGACCCGGC CAAACGGGAA 
GCCATTCTCG AGGCGGCCAA GCGCCTGTTC CTCTGCAACG GCTACGACGG CAGCAGCATG
GAAGCCATCG CCTCGGAAGC CGGCGTTTCC AAGCTCACCG TCTACAGCCA CTTCACCGAC
AAGGAAACCC TGTTCAGCGA AGCGGTGAAG GCCAAGTGCG CCGAGCAGCT TCCCGCCCTG
TACTTCCAGC TGGCCGAAGG CGCGCCGCTG GAAAAGGTCC TGCTGAATAT CGCCCGCGGC
TTCCACCGGC TGATCAACAG CCACGAGGCG ATCGCCCTGA CCCGCCTGAT GGCCGCGCAG
GCCGGGCAGA ACCCCAAGCT TTCCGAGCTG TTCTTCGAGG CCGGGCCGAA GCAGGTGATC
GACGAGATGG AACGCCTCCT CGAGCAGGCC CGCCGCAGCG GCAAGCTGGC GTTCCCGGAC
GCGCGACACG CCGCCGAACA CTTCTTCATG CTGGTCAAGG GCTGCGCCAA TTACCGTCTG
TTGATCGGCT GCGCCGAACC GCTGGACGAG GCCGAAGGCG AGCGGCACGT GGAAGAAGTG
GTGGCGCTGT TCCTGCGCGC CTTCGCCGCG GGCGGCTGA
 
Protein sequence
MSEPTSSVGP GRPKDPAKRE AILEAAKRLF LCNGYDGSSM EAIASEAGVS KLTVYSHFTD 
KETLFSEAVK AKCAEQLPAL YFQLAEGAPL EKVLLNIARG FHRLINSHEA IALTRLMAAQ
AGQNPKLSEL FFEAGPKQVI DEMERLLEQA RRSGKLAFPD ARHAAEHFFM LVKGCANYRL
LIGCAEPLDE AEGERHVEEV VALFLRAFAA GG