Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_16630 |
Symbol | |
ID | 4381616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1422613 |
End bp | 1423398 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323884 |
Product | putative outer membrane protein, OmpA |
Protein accession | YP_789472 |
Protein GI | 116051689 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0638477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGT ACATTGCCCT CCCCGCCGTA TCCCTGCTGG CCCTGGCGCT GGCCGCCTGC TCCACGCCGC CGAACGCCAA CCTGGAACAG GCCCGCAGCA ACTTCTCCGC GCTGCAGTCG CAGCCCGACG CGACCAAGGT CGCGGCCCTG GAAACCAAGG ACGCCGGCGA CTGGCTGGCC AAGGCCGACA AGGCCTACCA GGATGGCGAA GACCAGCGCG ACGTGGACCA ACTGGCCTAC CTGACCAACC AGCGCATCGA ACTGGCCAAG CAGACCATCG TCCTGCGCAA TGCCGAGGCG CAGCTGCAGA ACGCCTCCGC CCAGCGCGCC CAGGCCCGCC TCGACGCGCG CACCGCGCAA CTGGACAAGC TGCGCAGCCA GCTGAATGCC AAGCAGACCT CGCGCGGCAC CATGGTGACT TTCGGCGACG TGCTGTTCGA TCTCGACAAG TCCGACCTGA AGCCCGGCGC CATGCGCAAC ATCCAGCAAC TGGCCGAGTT CCTCCAGCAG AACCCGGAGC GCCAGGTGAT CGTAGAGGGC TACACCGATA GCACCGGTTC CGCCAACTAC AACCAGCGCC TGTCCGAGCG TCGTGCCGAC TCGGTGCGCA TGGCCCTGCT CAGCCGCGGC ATCAGCCCGG AACGCGTAGC CACCCGTGGC TACGGCAAGG AATATCCGGT GGCCAGCAAC GGCACCAGCT CCGGCCGTGC CATGAACCGT CGGGTGGAAG TCACCATTTC CAACGACGCC AAGCCGGTCG CGCCACGCTC CTCCGTCAGC GGCTGA
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Protein sequence | MRKYIALPAV SLLALALAAC STPPNANLEQ ARSNFSALQS QPDATKVAAL ETKDAGDWLA KADKAYQDGE DQRDVDQLAY LTNQRIELAK QTIVLRNAEA QLQNASAQRA QARLDARTAQ LDKLRSQLNA KQTSRGTMVT FGDVLFDLDK SDLKPGAMRN IQQLAEFLQQ NPERQVIVEG YTDSTGSANY NQRLSERRAD SVRMALLSRG ISPERVATRG YGKEYPVASN GTSSGRAMNR RVEVTISNDA KPVAPRSSVS G
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