Gene PA14_16630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16630 
Symbol 
ID4381616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1422613 
End bp1423398 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID639323884 
Productputative outer membrane protein, OmpA 
Protein accessionYP_789472 
Protein GI116051689 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0638477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGT ACATTGCCCT CCCCGCCGTA TCCCTGCTGG CCCTGGCGCT GGCCGCCTGC 
TCCACGCCGC CGAACGCCAA CCTGGAACAG GCCCGCAGCA ACTTCTCCGC GCTGCAGTCG
CAGCCCGACG CGACCAAGGT CGCGGCCCTG GAAACCAAGG ACGCCGGCGA CTGGCTGGCC
AAGGCCGACA AGGCCTACCA GGATGGCGAA GACCAGCGCG ACGTGGACCA ACTGGCCTAC
CTGACCAACC AGCGCATCGA ACTGGCCAAG CAGACCATCG TCCTGCGCAA TGCCGAGGCG
CAGCTGCAGA ACGCCTCCGC CCAGCGCGCC CAGGCCCGCC TCGACGCGCG CACCGCGCAA
CTGGACAAGC TGCGCAGCCA GCTGAATGCC AAGCAGACCT CGCGCGGCAC CATGGTGACT
TTCGGCGACG TGCTGTTCGA TCTCGACAAG TCCGACCTGA AGCCCGGCGC CATGCGCAAC
ATCCAGCAAC TGGCCGAGTT CCTCCAGCAG AACCCGGAGC GCCAGGTGAT CGTAGAGGGC
TACACCGATA GCACCGGTTC CGCCAACTAC AACCAGCGCC TGTCCGAGCG TCGTGCCGAC
TCGGTGCGCA TGGCCCTGCT CAGCCGCGGC ATCAGCCCGG AACGCGTAGC CACCCGTGGC
TACGGCAAGG AATATCCGGT GGCCAGCAAC GGCACCAGCT CCGGCCGTGC CATGAACCGT
CGGGTGGAAG TCACCATTTC CAACGACGCC AAGCCGGTCG CGCCACGCTC CTCCGTCAGC
GGCTGA
 
Protein sequence
MRKYIALPAV SLLALALAAC STPPNANLEQ ARSNFSALQS QPDATKVAAL ETKDAGDWLA 
KADKAYQDGE DQRDVDQLAY LTNQRIELAK QTIVLRNAEA QLQNASAQRA QARLDARTAQ
LDKLRSQLNA KQTSRGTMVT FGDVLFDLDK SDLKPGAMRN IQQLAEFLQQ NPERQVIVEG
YTDSTGSANY NQRLSERRAD SVRMALLSRG ISPERVATRG YGKEYPVASN GTSSGRAMNR
RVEVTISNDA KPVAPRSSVS G