| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_16040 |
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| Symbol | xerD |
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| ID | 4381624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1366492 |
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| End bp | 1367388 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639323837 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_789425 |
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| Protein GI | 116051736 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCC TCGAACATCC CCTGATCGAC CGTTTCCTCG ATGCCCTGTG GCTGGAAAAA
GGCCTTGCCG ACAACACCCG CGAGGCTTAT CGCAACGACC TCCAGCAGTT CAACGCCTGG
CTCGATGGCC GCGGGCTGCG CCTGGAGGGC ATCGGCCGCG ACGCCATCCT CGATCACCTG
GCCTGGCGCC TGGAACAGGG CTACAAGGCT CGCTCGACCG CGCGCTTCCT CTCCGGCCTG
CGTGGCTTCT ACCGCTATTG CCTGCGCGAT GGCCTGATCG CCGAGGATCC CACCTTGCAG
GTGGACCTGC CGCAACTGGG CAAGCCGTTG CCGAAATCCC TCTCCGAAGC GGACGTCGAG
GCATTGCTGG CGGCGCCGGA AGTCGACGAC CCGCTGGGCC TGCGCGATCG CACCATGCTC
GAAGTGCTGT ATGCCTGCGG CCTGCGGGTC AGCGAACTGG TCGGCCTGAC CCTGGAGCAG
GTCAACCTGC GCCAGGGCGT GGTCAAGGTC TTCGGCAAGG GCAGCAAGGA GCGCCTGGTG
CCGCTCGGCG AGGAAGCCAT CGGCTGGCTC GAACGCTACC TGCGCGAGGC GCGCGGCGAC
CTGCTCGGCG GGCGGCCCAG CGACGTGCTG TTCCCCAGCC TGCGCGGCGA ACAGATGACC
CGCCAGACCT TCTGGCATCG CATCAAGCAT CACGCGCAGG TGGCGGCGAT CGGTACGTCG
ATTTCGCCGC ACACCCTGCG CCACGCCTTC GCCACCCACC TGCTCAACCA TGGCGCCGAC
CTGCGGGTGG TGCAGATGCT GCTCGGCCAC AGCGACCTGT CGACCACCCA GATCTATACC
CATATCGCCC GGGCCCGCCT CCAGGATCTG CACGCACGCC ACCACCCGCG AGGCTGA
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| Protein sequence | MSTLEHPLID RFLDALWLEK GLADNTREAY RNDLQQFNAW LDGRGLRLEG IGRDAILDHL
AWRLEQGYKA RSTARFLSGL RGFYRYCLRD GLIAEDPTLQ VDLPQLGKPL PKSLSEADVE
ALLAAPEVDD PLGLRDRTML EVLYACGLRV SELVGLTLEQ VNLRQGVVKV FGKGSKERLV
PLGEEAIGWL ERYLREARGD LLGGRPSDVL FPSLRGEQMT RQTFWHRIKH HAQVAAIGTS
ISPHTLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HIARARLQDL HARHHPRG
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