Gene PA14_16030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16030 
Symbol 
ID4381625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1364442 
End bp1366277 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content68% 
IMG OID639323836 
Productputative sodium/hydrogen antiporter 
Protein accessionYP_789424 
Protein GI116051737 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGA ACGCTATCCT GCTCGCCCTC GGCGGCATCG GTGCCGCCGC CCTGCTCAGT 
CAATGGCTGG CCTGGCGCCT GCGCCTGCCA GCCATTCTTT TCCTGCTGCT GTCCGGGATC
GTCGCCGGCC CCCTGCTCGG CTGGCTCGAT CCGGACGAGA TGTTCGGCCC CCTGCTGTTC
CCACTGGTAT CCCTGGCAGT GGCGCTGATC CTCTTCGAGG GCAGCCTGAC CCTGCATTTC
AGCGAATGGA AGGAAATCGG CACCGTGGTG CACCGAATGG TGACCATCGG CGCGCTCTCG
ACCTGGGGCG TGATCGCCCT GGCCGCCCAC TACCTGCTCG ACTTCAGCTG GGAAATGGCC
CTGCTGTTCG GCACCCTGAC CCTGGTCACC GGGCCCACGG TGATCGTCCC GATGCTGCGG
GTGGTCCGGC CCAAGGCCGC GGTGGCGAAC ATCCTGCGCT GGGAAGGCAT CGTCATCGAT
CCCATCGGCG CCCTGCTGGC AGTAGTGGTG TACAGCTTCA TCATCTCCAG CGGCGAAGGC
GAAGGCTGGC TGCACAGCCT GCAGACCTTC GGCGGGGTGA TCCTCTGCGG CAGCCTGTTC
GGCATCCTCG GCGGCTGGGC GCTGGGCATC GTCCTACGCC GCCACTGGCT GCCGGACTAC
CTGCACAACC TGGCGACGCT GGCCGCGGTG CTGGGCGTAT TCATCGCCTC GAACCGGGTG
ATGCACGAAT CCGGACTGCT CGCCGTCACC CTGATGGGCA TGGGCCTGGC CAACATGAAG
GGCGTCGACG TACGGCAGAT CCTGCACTTC AAGGAAAACC TCAGCGTCCT GCTGATTTCC
GGCCTGTTCA TCCTCCTGGC CGCGCGCCTG GACATCAATG CCCTGCTCGG CCTGGGCCCG
GCGGCGCTGC TGGTGCTGCT GCTGATCCAG TTCGTCGCCC GGCCGCTGAA CGTGGCGCTG
TCGACCTGGG GTTCGCCGCT GAGCTGGCGC GAGCGCGCCC TGCTCAGCTG GATCGCCCCG
CGCGGGATCG TCGCCGCGGC GGTCTCGGCG ATCTTCGCCA TCCGCCTGAG CGCCGAAGGC
CATGCCCAGG CGGCGCTGCT GGTGCCGCTG ACCTTCCTGG TGATCATCGG CACGGTGGTT
CTGCAAAGCG CCACCGCCCG CCCCCTGGCG CGCCTGCTGA AGGTCGCCGA GCCCTCGCCC
AGCGGCTACC TGATCGTCGG CGCCAATCCG GTCGGGCGCG CCATCGGCAA GGCCCTGAAG
AGCCTCGGCA GCCGCGTGCT GCTGACTGAT TCGAGCTGGG AAAACATCCG CGCCGCCCGC
ATGGACAACC TGCCCACCTA TTTCGGCAAT CCCACCTCGC AGCACGCCGA AGCCCACCTC
GACCTGGTCG GCATCGGGCA TTTGCTGGGG GTTTCTCCGG CCGGCGAGCT GAACACCCTG
GCGGCCATGC GCTTCCGCCA CGAGTTCGGC CATCGCCAGT TGTTCGGCCT GCCGACCAGC
CAGGAAGCCA AGCGTACCGA CAAGCACCGC TCCAGCGACG AACACCGTGG CCGCCCGCTT
GGCCAGCGAC CGCTGACCTA CGCGCAGTTC GCCAGCCTGC TGTCGCGCGG CGCCGAAATC
CGCACCACCC TGCTCACCGA CACCTTCGGC TGGAACGACT ACCAGGCGCT GCACGGCGAG
TCCGCGACCC TGCTGTTCGC CCGCGATCCG AACGGCAGGA TGCACGTCGC CACGCCACAG
TCCACGCTGG CGCCGGGCAC CGGCTGGACG CTGCTGTCGC TGATCGAGGC GGAACCGTCA
GTCAGCAAGT CGCAGGCCAC GGAAATCGCC GACTAG
 
Protein sequence
MDQNAILLAL GGIGAAALLS QWLAWRLRLP AILFLLLSGI VAGPLLGWLD PDEMFGPLLF 
PLVSLAVALI LFEGSLTLHF SEWKEIGTVV HRMVTIGALS TWGVIALAAH YLLDFSWEMA
LLFGTLTLVT GPTVIVPMLR VVRPKAAVAN ILRWEGIVID PIGALLAVVV YSFIISSGEG
EGWLHSLQTF GGVILCGSLF GILGGWALGI VLRRHWLPDY LHNLATLAAV LGVFIASNRV
MHESGLLAVT LMGMGLANMK GVDVRQILHF KENLSVLLIS GLFILLAARL DINALLGLGP
AALLVLLLIQ FVARPLNVAL STWGSPLSWR ERALLSWIAP RGIVAAAVSA IFAIRLSAEG
HAQAALLVPL TFLVIIGTVV LQSATARPLA RLLKVAEPSP SGYLIVGANP VGRAIGKALK
SLGSRVLLTD SSWENIRAAR MDNLPTYFGN PTSQHAEAHL DLVGIGHLLG VSPAGELNTL
AAMRFRHEFG HRQLFGLPTS QEAKRTDKHR SSDEHRGRPL GQRPLTYAQF ASLLSRGAEI
RTTLLTDTFG WNDYQALHGE SATLLFARDP NGRMHVATPQ STLAPGTGWT LLSLIEAEPS
VSKSQATEIA D