Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_15920 |
Symbol | |
ID | 4381635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1355439 |
End bp | 1356752 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323826 |
Product | major facilitator transporter |
Protein accession | YP_789414 |
Protein GI | 116051747 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.246808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG CCACCCTCGC CGCCGACGCC GCTCCGGAAC CGGCCAACTC GACCACCCGG GTCGCAGTCG CCAGCTTCAT CGGCACCGCC ATCGAATTCT ACGATTTCTA CGTCTATGCC ACTGCCGCCG CCCTGGTGAT CGGTCCGGTA TTCTTCCCGC AGACATCCGG CACCGCGCAG ATGCTCAGCG CCTTCCTCAC CTTCCGTATC GCCTTCCTCG CTCGCCCGCT GGGCTCGGCG CTGTTCGGCC ACTTCGGCGA CCGCATCGGG CGCAAGTCAA CCCTGGTCGC CTCGCTGCTG CTGATGGGGG TATCCACCAC CCTGATCGGC GTCCTCCCCG GCTACGACAG CATCGGCTAC TGGGCGCCGT TGCTGCTCTG CGTGCTGCGC TTCGGCCAGG GCCTCGGCCT CGGCGGCGAG TGGGGCGGCG CCGCGCTGCT GGCCACGGAG AACGCGCCGG CCGGCAAGCG CGCCTGGTTC GGCATGTTTC CCCAGCTCGG CCCGTCGATC GGCTTCCTCG CCGCCAACGG CCTGTTCCTG GCCCTGGCGA TGCTACTCAG CGAGGAGCAG TTCCGTGACT GGGGCTGGCG GATCCCGTTC CTGCTCAGCG CGGCGCTGGT CGTGGTCGGC CTCTACGTAC GCCTGAAGCT GGCGGAAACC CCGGTGTTCG CCAAGGCCAT GGCCAAGCAC GAGAGGGTCC GCCTGCCGAT CGCCGAGCTG TTCGCCCAGC ACTGGCGGCC GACCCTGCTC GGCGCCCTGG CGATGGTGGT GTGTTATGCG CTGTTCTATA TCTCCACGGT GTTCTCGCTG AGCTACGGGG TGGCCAGCCT CGGCTTCAGC CGCGAGGAGT TCCTTGGTCT GCTGTGCCTC GCGGTGCTCT TCATGGCCGC CGCCACGCCG CTGTCGGCCT GGCTCAGCGA CCGCTTCGGA CGCAAGCCGG TACTGCTGCT CGGCAGCCTG GCGGCGATCG CCTCCGGCTT CGCCATGGAG CCGCTGCTCA GCCAGGGCTC GACGTTCAGC GTCGCCCTGT TCCTCTGCAT CGAGCTGTTC CTGATGGGGG TCACCTTCGC CCCGATGGGC GCGCTGCTGC CGGAAATATT CCCCACCCAC GTGCGCTACA CCGGCGCGTC GGCGGCCTAC AACCTGGGCG GCATTCTCGG CGCCTCGGTG GCGCCCTATA TCGCCCAGAA GCTGGTCGGC ATCGGCGGCC TGGGCTGGGT CGGCGGCTAC GTCTCCGCAG CGGCGCTGCT CAGCCTGCTG GCGGTGCTGT GCCTGAAGGA AACCCGCGAC AACGACCTCG GCGCAGTGTC CTGA
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Protein sequence | MTAATLAADA APEPANSTTR VAVASFIGTA IEFYDFYVYA TAAALVIGPV FFPQTSGTAQ MLSAFLTFRI AFLARPLGSA LFGHFGDRIG RKSTLVASLL LMGVSTTLIG VLPGYDSIGY WAPLLLCVLR FGQGLGLGGE WGGAALLATE NAPAGKRAWF GMFPQLGPSI GFLAANGLFL ALAMLLSEEQ FRDWGWRIPF LLSAALVVVG LYVRLKLAET PVFAKAMAKH ERVRLPIAEL FAQHWRPTLL GALAMVVCYA LFYISTVFSL SYGVASLGFS REEFLGLLCL AVLFMAAATP LSAWLSDRFG RKPVLLLGSL AAIASGFAME PLLSQGSTFS VALFLCIELF LMGVTFAPMG ALLPEIFPTH VRYTGASAAY NLGGILGASV APYIAQKLVG IGGLGWVGGY VSAAALLSLL AVLCLKETRD NDLGAVS
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