Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_13500 |
Symbol | |
ID | 4381941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1160401 |
End bp | 1161378 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323635 |
Product | putative 2-hydroxyacid dehydrogenase |
Protein accession | YP_789224 |
Protein GI | 116051933 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA ACGTCTTCGT CTTCAGTCGC CTCGCCCCCG AGCATCTCGA ACGCCTGCAA CGCCAGTTCA ACGTCCGCGT GCTCGAACCG AAACAGGGCG ACATCGACGC CCAGTACGCC GCCGCCCTGC CCGATACCCA CGGCATGATC GGCGTCGGCC GGCCGCTCGG CGCCAGGCAA CTGGAACAGG CGAAGCAGCT GGAAGTCATC TCCAGCGTCT CGGTCGGCTA CGACAACTAT GACCTGGACT ACCTGAACCG CCGCGGCATC GCCCTCACCA ACACGCCCGA CGTCCTCACC GAGACCACCG CCGACCTCGG CTTCGCCCTG CTGATCAGCG CCGCGCGACG GGTCGCCGAA CTGGACGCCT GGGTCAAGGC CGGGAACTGG AAGCGCACCG TCGATGCCCC GCAGTTCGGC ACCGATGTGC ATGGCAAGAA ACTCGGCATC CTCGGCCTCG GCCGGATCGG CGCGGCCATC GCCCGGCGCG GCCGTTTCGG CTTCGGCATG CAGGTGCTCT ACCACGGCAA CAACCGCAAG CCGGAACTGG AACAGGAACT CGGCGCGCGC TTCCTCGGCT TCGACGAACT GCTCGGCGAG GCCGACTTCG TCTGCGTGGT GGTGCCGCTG GGAGCGCAGA CCCGGCGGTT GATCGGCGCG CGCGAACTGG GCCTGATGAA GCCCTCGGCG ATCCTGGTCA ACGTCGCCCG CGGCCAGGTG GTCGACGAGG CCGCGCTGGT CGCCGCCCTG CGGGAGAAAC GCATCCTCGG CGCCGGCCTG GATGTCTACG AGAAGGAACC GCTGGCCGAA TCGCCGCTGT TCGCCCTGGA CAACGTGGTG ACCCTGCCGC ACATCGGCTC GGCCACCCAC GAGACCCGCC GGGCCATGGC CGAGCGGGCG CTGCAGAACT TCGAGGCGGC CCTGCGCGGC GAGCGGCCGC TGGACCTGGT CAATCCGCAG GTGTGGCGAC GCGGCTGA
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Protein sequence | MKKNVFVFSR LAPEHLERLQ RQFNVRVLEP KQGDIDAQYA AALPDTHGMI GVGRPLGARQ LEQAKQLEVI SSVSVGYDNY DLDYLNRRGI ALTNTPDVLT ETTADLGFAL LISAARRVAE LDAWVKAGNW KRTVDAPQFG TDVHGKKLGI LGLGRIGAAI ARRGRFGFGM QVLYHGNNRK PELEQELGAR FLGFDELLGE ADFVCVVVPL GAQTRRLIGA RELGLMKPSA ILVNVARGQV VDEAALVAAL REKRILGAGL DVYEKEPLAE SPLFALDNVV TLPHIGSATH ETRRAMAERA LQNFEAALRG ERPLDLVNPQ VWRRG
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