| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_13460 |
|---|
| Symbol | |
|---|
| ID | 4381944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1157864 |
|---|
| End bp | 1158373 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639323632 |
|---|
| Product | RNA polymerase sigma factor |
|---|
| Protein accession | YP_789221 |
|---|
| Protein GI | 116051936 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.0861545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAGCG CCGACCTCGC CCATGCGGCC GCGTTGCATA CCCTCTACAG CGACCACCAC
CACTGGCTCA CGGGCTGGCT GCGGCGCCGC CTCGGCTGCC CGCAGAACGC CGCCGACCTG
GCCCAGGACA CCTTCGTCAA GGTCCTGGTT TCGCGCCAGG CCGCGCGCAT CGACGAACCG
CGCGCCTTCC TCACCACCAT CGCCCGCCGC GTGCTGTGCA ACCACTACCG CCGCCAGGAC
GTCGAGCGCG CCTACCTGGA AGCCCTGGCC AGCCTGCCCG AGCGGGAAGT CCCCAGCGAA
GAGACCCGCG CCATCGTCCT GGAGACCCTG GTCGAGCTGG ACCGTCTGCT CGACGGCCTG
CCGCCGCTGG CCAAGGAGAC CTTCCTGCTG GCCCAGCTCG ACGGCCTGGG CTACGCCGAG
ATCGCCACGC AGCTGGGCAT CTCCCTGAGC AGCGTCAAGC GCTACATGCT CAAGGCTGCG
CAACGCTGCT ACTTCGCCGA GCTGCCATGA
|
|---|
| Protein sequence | MSSADLAHAA ALHTLYSDHH HWLTGWLRRR LGCPQNAADL AQDTFVKVLV SRQAARIDEP
RAFLTTIARR VLCNHYRRQD VERAYLEALA SLPEREVPSE ETRAIVLETL VELDRLLDGL
PPLAKETFLL AQLDGLGYAE IATQLGISLS SVKRYMLKAA QRCYFAELP
|
|---|
| |