Gene PA14_12310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_12310 
Symbol 
ID4382012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1062074 
End bp1062556 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID639323547 
Productputative metalloprotease 
Protein accessionYP_789136 
Protein GI116052021 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTG AGCTCGACCT GCAGGTCGCC AGCGCCGCCC CGGACCTGCC CTCCGAAGCA 
CAGTTCCGCG CCTGGTGCGA ACTGGCCCTG CGCCAGCGTC CGGAGTCGGA GCTGACCATC
CGCCTGGTGG ACGAGGCCGA AGGCCTGGAA CTGAACAGCA CCTACCGGCA CAAGGACTAC
GCGACCAACG TGCTGTCCTT CCCCGCCGAT GTCCCGGACG AGCTTCTCGA TATCCCGCTG
CTCGGCGACC TGGTGATCTG CGCCCCGGTG GTCGCCCGCG AAGCCCTGGA ACAGCGCAAG
CCGTTGCAGG CCCACTGGGC CCACCTGGTG ATCCACGGCT GCCTGCACCT GCTCGGCTAC
GACCACATCG ACGACGCCGA AGCGGAAGAA ATGGAAACAC TGGAACGTGA ATTGCTGGCG
GAACTGGGTC ATCCCGATCC GTACGCCTGC GACGACGAAG AGCCACCGAG CAAGGAAAAA
TGA
 
Protein sequence
MPLELDLQVA SAAPDLPSEA QFRAWCELAL RQRPESELTI RLVDEAEGLE LNSTYRHKDY 
ATNVLSFPAD VPDELLDIPL LGDLVICAPV VAREALEQRK PLQAHWAHLV IHGCLHLLGY
DHIDDAEAEE METLERELLA ELGHPDPYAC DDEEPPSKEK