| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_12020 |
|---|
| Symbol | nadD |
|---|
| ID | 4383493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1039403 |
|---|
| End bp | 1040047 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639323524 |
|---|
| Product | nicotinic acid mononucleotide adenylyltransferase |
|---|
| Protein accession | YP_789113 |
|---|
| Protein GI | 116052044 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.101829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAC GTATCGGCCT GTTCGGCGGC ACTTTCGACC CCGTGCATAT CGGACATATG
CGCAGCGCCG TGGAAATGGC CGAGCAGTTC GCCCTCGACG AACTGCGCCT GCTGCCCAAT
GCGCGGCCGC CGCACCGGGA AACCCCGCAG GTGTCGGCCG CGCAGCGGTT GGCGATGGTC
GAGCGGGCGG TGGCGGGAGT CGAGCGATTG ACGGTCGATC CCCGCGAACT GCAGCGCGAC
AAGCCGTCCT ACACCATCGA CACCCTGGAG TCGGTGCGGG CGGAACTGGC GGCCGACGAC
CAGTTGTTCA TGCTGATCGG CTGGGATGCC TTCTGCGGCT TGCCGACGTG GCACCGCTGG
GAGGCGTTGC TGGATCACTG CCACATCGTC GTGTTGCAGC GTCCGGATGC CGACAGCGAG
CCGCCGGAGT CGCTGCGCGA CCTGCTGGCG GCGCGGAGCG TGGCCGACCC GCAGGCCCTG
AAAGGGCCGG GCGGGCAGAT CACCTTCGTC TGGCAGACGC CGCTGGCGGT GTCCGCCACC
CAGATCCGTG CGCTGCTGGG TGCCGGGCGC TCCGTGCGTT TCCTGGTGCC GGACGCGGTA
TTGAACTACA TCGAGGCGCA CCACCTGTAT CGTGCGCCAC ACTGA
|
|---|
| Protein sequence | MGKRIGLFGG TFDPVHIGHM RSAVEMAEQF ALDELRLLPN ARPPHRETPQ VSAAQRLAMV
ERAVAGVERL TVDPRELQRD KPSYTIDTLE SVRAELAADD QLFMLIGWDA FCGLPTWHRW
EALLDHCHIV VLQRPDADSE PPESLRDLLA ARSVADPQAL KGPGGQITFV WQTPLAVSAT
QIRALLGAGR SVRFLVPDAV LNYIEAHHLY RAPH
|
|---|
| |