Gene PA14_11960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_11960 
Symbol 
ID4383498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1033659 
End bp1034972 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content70% 
IMG OID639323519 
Producthypothetical protein 
Protein accessionYP_789108 
Protein GI116052049 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0023163 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCG ACAGCTTCAA CGCCTGGATG GCCGCCAACC CCGAGTGGCT GGGGATGGCC 
ATCTTCCTCA TCGCCTTCCT CGAATGCGCG GCCATCGTCG GCATCGTCCT GCCCGGCGTG
GTGCTGCTGT TCGGCGTCGC GGTGATCGCC GGCAGCGGCG CCCTCAGCCT CGGCGAAACC
CTGATGCTGG CCTACGCCGG CGGGGTGCTG GGCGACCTCA GCTCGTACTG GATCGGCCGC
CGCTTCCACC AGAACATCCG CCGCCTGCCC GGCCTGCGCA GCCATCCGCA GTGGATCACC
GCCGCCGAGG TGTACTTCGA GCGCTACGGT ATCGCCAGCC TGCTGGTCGG CCGCTTCATC
GGCGCCCTGC GACCGATGCT GCCGATGGTC GCCGGCATGC TCGACATGCC GTTCGGCCGT
TTTCTCGGCG TTTCGCTGAT TGCCGCCGCC GGCTGGGCGG TCGCCTACCT GTTGCCCGGC
TGGGCTACCG GCGCAGCCCT GCGCCTGCCG TTGCCGGAAG GCTTCTGGAG CGAAGCCGGG
ATCGTCGCGG CCTGCCTGGC GGTGCTGGTC GGCGTGGTAG TCCAGGCCAG CCTGCGACGC
AAACGCTGGG CAACCGCTGT GGCGGCCGCG CTGAGCCTGG TCCTGCTGCT GGCGATGACC
GTCGCCTGGC CGTACCTCCA GGACCTCGAC CAGGGCCTGA TGACGCTGGT CCAGGAGCAT
CGCAACGCCG ACCTGAACCC GGTGATGGTG GTGGTCACCC GGCTCGGCGA TTTCCGCACC
CAGTTCATCG CCGGCGCGCT GCTCGGCGGT ATCCTCCTGC TGACCCGGCA ATGGCGTCCG
GCCATCTTCG CCATCGGCAC CCTGGTGGGT ACCGCGCTGG CCAACCAGAC CCTGAAGACC
CTGTTCGCCC GCGCCCGCCC GGAAGTGCTG GCCGAACCGC TGAGCAGCTT CAGCTTCCCC
AGCGGACACA GCTCGGCGTC CTTCGCCTTC TTCCTCACCC TGGGCGTCCT CGCCAGCCGC
CAGCAACCGC CGCGCTGGCG CCTGACCTGG GTACTGCTGG CGGTGATCCC GTCGCTGAGC
ATCGCCCTGT CGCGGGTCTA CCTTGGCGTG CACTGGCCGT CGGACATCGT CGCCGGCGCC
CTGCTCGCCA CTACGGTCTG CGCCGCCAGC CTGTGGCTGA GCCAGCGCCG CGAGTCGCTG
CCGGCGCTGC CGCAACGGGT CTGGTGGCTG CTGTTGCCGG TCTGCGTGGC GACCCTGGCG
ATCGCCGCCG GCTGGGCCCT GCCGGAAGCC ATTGCGCGCT ACCGGCCGCT GTGA
 
Protein sequence
MSLDSFNAWM AANPEWLGMA IFLIAFLECA AIVGIVLPGV VLLFGVAVIA GSGALSLGET 
LMLAYAGGVL GDLSSYWIGR RFHQNIRRLP GLRSHPQWIT AAEVYFERYG IASLLVGRFI
GALRPMLPMV AGMLDMPFGR FLGVSLIAAA GWAVAYLLPG WATGAALRLP LPEGFWSEAG
IVAACLAVLV GVVVQASLRR KRWATAVAAA LSLVLLLAMT VAWPYLQDLD QGLMTLVQEH
RNADLNPVMV VVTRLGDFRT QFIAGALLGG ILLLTRQWRP AIFAIGTLVG TALANQTLKT
LFARARPEVL AEPLSSFSFP SGHSSASFAF FLTLGVLASR QQPPRWRLTW VLLAVIPSLS
IALSRVYLGV HWPSDIVAGA LLATTVCAAS LWLSQRRESL PALPQRVWWL LLPVCVATLA
IAAGWALPEA IARYRPL