Gene PA14_11890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_11890 
Symbol 
ID4382027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1028696 
End bp1029337 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID639323513 
Producthypothetical protein 
Protein accessionYP_789102 
Protein GI116052055 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.465286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCGA CGCCCAAGCG CGTTCTGCTC GCCGGCGCGA CCGGTCTTAC CGGCGAGCAC 
CTGTTGGATC GGATATTGAG CGAGCCGACC CTGGCCAAGG TCATCGCCCC TGCCCGCAAG
GCGCTGGCCG AGCATCCGCG GCTGGACAAC CCGGTCGGCC CGCTGGCCGA GCTGCTGCCG
CAACTCAACG GCAGCATCGA TACCGCCTTC TGCTGCCTCG GCACCACGAT CAAGGAAGCC
GGCTCGGAGG AGGCCTTCCG CGCGGTCGAT TTCGACCTGC CGCTGGCGGT GGGCAAGCGC
GCGCTGGAGA TGGGCGCCCG GCATTACCTG GTGGTCAGCG CCCTGGGCGC CGACGCCAAG
TCGTCGATCT TCTACAACCG GGTCAAGGGC GAACTGGAGC AGGCCCTGCA GGAACAGGGC
TGGCCACAGC TGACCATCGC CCGGCCATCG CTGCTGTTCG GCCCGCGCGA GGAATTCCGC
CTGGCCGAGA TCCTCGCCGC GCCGATCGCC CGCATCCTTC CCGGCAAGTA CCACGGCATC
GAGGCCTGCG ACCTGGCCCG CGCGCTCTGG CGCCTGGCGC TGGAGGAAGG CAAGGGCGTG
CGCATCGTCG AGTCCGACGA ACTGCGCAAG CTGGGGAAAT GA
 
Protein sequence
MHSTPKRVLL AGATGLTGEH LLDRILSEPT LAKVIAPARK ALAEHPRLDN PVGPLAELLP 
QLNGSIDTAF CCLGTTIKEA GSEEAFRAVD FDLPLAVGKR ALEMGARHYL VVSALGADAK
SSIFYNRVKG ELEQALQEQG WPQLTIARPS LLFGPREEFR LAEILAAPIA RILPGKYHGI
EACDLARALW RLALEEGKGV RIVESDELRK LGK