Gene PA14_10240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_10240 
Symbol 
ID4382161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp881150 
End bp882262 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID639323379 
Productbranched-chain alpha-keto acid dehydrogenase subunit E2 
Protein accessionYP_788968 
Protein GI116052188 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGA TCCATACACT GACCATGCCC AAGTGGGGCC TGTCGATGAC CGAGGGTCGG 
GTGGACGCCT GGCTCAAGGA AGAGGGCGCG CATATCGAGA AAGGCGACGA GGTGCTCGAC
GTGGAGACCG ACAAGATCTC CAGCAGCGTC GAGGCGCCCT TCTCGGGCGT GCTGCGGCGC
AAGGTGGCGC GCGAGGACGA GACCCTGGCG GTCGGCGCGC TGCTCGGCGT GGTGGTCGAG
GGCGAGGCGA GCGACGAGGA GATCGACGCA CTGGTGCAAC GCTTCCAGGC CGAATTCGTA
CCCGCCGACG AGGACGCTGG GGATAGCGGA CCGGCACCGC GGAAAGTCGA GCTGGACGGG
CGCCTCCTGC GCTATTTCGA CCGCGGCGAG GGCGATCCGG CGCTACTGCT GATCCACGGT
TTCGGTGGCG ACCTGAACAA CTGGTTGTTC AACCACGAGG CGCTGGCCGC CGAGCGGCGG
GTGATCGCTC TAGACCTGCC GGGCCACGGC GAGTCCGGCA AGGCCCTGGT GCGCGGCGAC
CTCGATGAAC TCAGCGGCAG CGTGCTGGCC CTGCTCGACC ACCTCGACCT GGAACAGGTA
CACCTGGCCG GTCACTCCAT GGGGGGAGCG GTGGCGCTGA ACTGCGCGCG CCTGGCGCCG
CAGCGGGTGC TGTCGCTGAG CCTGATCGGC AGCGCCGGCC TCGGCGAGGA GATCAACGGC
GACTACCTGC GCGGCTTCGT CGAGGCGGCC AACCGCAACG CGTTGAAGCC GCAACTGGTG
CAGTTGTTCT CCGACCCCGA GCTGGTCACC CGGCAGATGC TCGAGGACAT GCTCCGCTAC
AAGCGCCTGG AAGGCGTCGA TGCGGCCCTG CGCCAGTTGC TGGACAACCT GTTCGCCGAC
GGTCGCCAGC GCAACGACCT GCGTGCCGTG GCGAGCGAGG GCCGCCAGCC GGTCCTGGCG
ATCTGGGGCA GCGATGACGC GATCATCCCG GCGCGGCATG CCGAGGGCCT GCCAGCCCAG
GTGGAGATCA TTCCCGGACA GGCGCACATG GTGCAGATGG AGGCCGCCGA GCAGGTCAAC
CGCCTGCTGC TCGACTTCCT CCGCCAGCAT TGA
 
Protein sequence
MSRIHTLTMP KWGLSMTEGR VDAWLKEEGA HIEKGDEVLD VETDKISSSV EAPFSGVLRR 
KVAREDETLA VGALLGVVVE GEASDEEIDA LVQRFQAEFV PADEDAGDSG PAPRKVELDG
RLLRYFDRGE GDPALLLIHG FGGDLNNWLF NHEALAAERR VIALDLPGHG ESGKALVRGD
LDELSGSVLA LLDHLDLEQV HLAGHSMGGA VALNCARLAP QRVLSLSLIG SAGLGEEING
DYLRGFVEAA NRNALKPQLV QLFSDPELVT RQMLEDMLRY KRLEGVDAAL RQLLDNLFAD
GRQRNDLRAV ASEGRQPVLA IWGSDDAIIP ARHAEGLPAQ VEIIPGQAHM VQMEAAEQVN
RLLLDFLRQH