Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09300 |
Symbol | |
ID | 4385697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 796493 |
End bp | 798205 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639323307 |
Product | putative ATP-binding component of ABC transporter |
Protein accession | YP_788896 |
Protein GI | 116052260 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00251993 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCCGG TGCTGTGGCG CCTGCTGCGC ACCTATCGCT GGCGGCTGGC GGCGGCCATG GGGTTGCAGG CCCTGGCCGG GCTCTGCTCG CTGTTGCCCT GGATGCTTCT CGCCTGGCTC GCCGAGCCGC TGGCGCGCGG CCAGGCGCAG CCGGCCCTGC TGGCCCTGGT GCTGCTGGCG GTGCTGGCTT GGTTGGGCTG CCAGGCGCTG GCCGCGCACC TGGCCCACCG GGTCGACGCG GACCTCTGCA ACGACCTGCG CCTGCGCCTG CTGGCGCACC TGCAACGGCT ACCGCTGGAC TGGTTCGGTC GCCAGGGTCC GGACGGCGTG GCGCGCCTCG TGGAGCAGGA CGTGCGGGCC CTGCACCAAC TGATCGCGCA CGCTCCCAAC GATCTCAGCA ACCTGTTGGT GGTGCCGCTC GTCGCGTTGC TCTGGCTGGC CTGGCTGCAC CCCTGGCTGC TGCTGTTCTG CCTGCTGCCG CTGGTGCTGG CCGCCGCCGG CTTCCTGCTG CTGCGCTCGG CGTGCTACCG CGACCAGGTG CTGCGGCGCA ACGCTGCGCT GGAAAGGCTC TCGGCGGACT ATGGCGAATT CGCCCACAAC CTGCTGCTGG CCCGACAGTA CCCCGGCGCC GGCATACAAC AGGGCGCCGA GGCGTCGGCG GCGGCCTTCG GCGAAGCGTT CGGCGCCTGG GTGAAGCGGG TCGGCCACCT CGCCGCGCTG GTCTACGTGC AGTTGTCGAC GCCCTGGCTG CTGGCCTGGG TCCTGCTCGG CACGCTGGCT CTGGATGCCC TCGGCGTGCC GCTGGCGCTC GGCCAGGCCT GCGCCTTCCT GCTCCTGCTG CGGGCCCTGG CCGCCCCGGT GCAGGCGCTC GGCCACGGCG GCGACGCGCT GCTGGGCGCG CGCGCCGCCG CCGAGCGCCT GCAGCAGGTG TTCGACCAGG CGCCGCTGGC CGAGGGCCGC TCGACCCGCG AGCTGGTCGA TGGCGCGGTG GCGCTGCGCG GCCTGGGCCA TGCCTACGAG GGCGTGGAGG TCCTGGCCGA TATCGACCTG GAGCTGAAGG ATGGCAGCCT GGTGGCCCTG GTCGGTCCCT CGGGCTCCGG CAAGAGCACC CTGCTGCACC TGCTGGCGCG CTACATGGAC GCGCAGCGCG GCGAACTGGA GATTGGCGGC CTGGCACTGA AGGACATGCC CGATGCCGTG CGCCATCGGC ATATCGCGCT GGTCGGCCAG CAGGCGGCGG CGCTGGAGAT ATCCCTGGCC GACAACATCG CCCTGTTCCG CCCCGATGCC GATCTCCAGG AGATTCGCCA GGCGGCCCGT GACGCCTGCC TCGACGAGCG CATCATGGCC CTGCCGCGTG GCTACGACAG CGTGCCGGGA CGCGACCTGC AACTGTCCGG CGGCGAACTG CAACGACTGG CCCTGGCCCG TGCGCTGCTA TCGCCGGCGC GCCTGTTGCT GCTCGACGAG CCGACCTCGG CGCTGGATCC GCAGACCGCC CGGCAGGTCC TGCGCAACCT GCGCGAACGC GGCGGCGGCC GGACCCGGGT GATCGTCGCC CATCGTCTGG CCGAAGTCAG CGATGCCGAC CTGATCCTGG TGCTGGTCGC TGGCCGTCTG GTCGAACGCG GCGAGCACGC GGCGCTGTTG GCGGCGGACG GCGCCTATGC GCGCTTGTGG CGTGAACAGA ACGGCGCGGA GGTGGCGGCA TGA
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Protein sequence | MTPVLWRLLR TYRWRLAAAM GLQALAGLCS LLPWMLLAWL AEPLARGQAQ PALLALVLLA VLAWLGCQAL AAHLAHRVDA DLCNDLRLRL LAHLQRLPLD WFGRQGPDGV ARLVEQDVRA LHQLIAHAPN DLSNLLVVPL VALLWLAWLH PWLLLFCLLP LVLAAAGFLL LRSACYRDQV LRRNAALERL SADYGEFAHN LLLARQYPGA GIQQGAEASA AAFGEAFGAW VKRVGHLAAL VYVQLSTPWL LAWVLLGTLA LDALGVPLAL GQACAFLLLL RALAAPVQAL GHGGDALLGA RAAAERLQQV FDQAPLAEGR STRELVDGAV ALRGLGHAYE GVEVLADIDL ELKDGSLVAL VGPSGSGKST LLHLLARYMD AQRGELEIGG LALKDMPDAV RHRHIALVGQ QAAALEISLA DNIALFRPDA DLQEIRQAAR DACLDERIMA LPRGYDSVPG RDLQLSGGEL QRLALARALL SPARLLLLDE PTSALDPQTA RQVLRNLRER GGGRTRVIVA HRLAEVSDAD LILVLVAGRL VERGEHAALL AADGAYARLW REQNGAEVAA
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