Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09195 |
Symbol | |
ID | 4384141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 778276 |
End bp | 779664 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323297 |
Product | major facilitator transporter |
Protein accession | YP_788886 |
Protein GI | 116054452 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0308711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.679663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACT CACATACTGA GCGGATGAGC GGTACCGAAA CGCGAGCGGC CGTCGGGCTG TCACTGGTAT TCGCCTTCCG CATGCTCGGC ATGTTCATGG TCCTGCCGGT GCTGGCCACC TACGGCCAGG ACCTGGCCGG CGCGACCCCG GCGCTGATCG GCCTGGCCAT CGGCGCCTAT GGCCTGACCC AGGCGATCCT GCAGATTCCC TTCGGGACCA TTTCCGACCG CATCGGCCGG CGCCCGGTGA TCGTCGTCGG GCTGCTGATC TTTGCCGCCG GCGCGGCCCT CGCGGCCAAT GCCGACTCCA TCTGGGGGGT GATCGCCGGC CGCGTCCTGC AGGGCGCCGG GGCGATCTCG GCGGCGGTGA TGGCACTGCT CTCCGACCTC ACCCGCGAGC AACACCGGAC CAAGGCGATG GCGATGATCG GCATGAGCAT CGGCGTCTCC TTCGCCGTGG CCATGGTGCT CGGCCCGGTG CTGACCCATC TGTTCGGCCT GCATGGGCTG TTCTGGTTCA CCGCCGGGAT GGCGCTGGTC GGCCTGCTGC TGATCCTGTT CTTCGTCCCA CAGCCGGACC ACATGACCCA GCACCGCGAA TCCAGCGTGG CGCGCCAGGC CCTGCTGCCG ACCCTGAAGC ACGGCGACCT GCTGCGCCTG GACGCCGGCA TCCTGATCCT CCACGCCATC CTCATGGCCA GCTTCGTCGC CTTGCCGCTG GCGCTGGTGC ACGAGGGTGG CCTGCCCAAG GAGCAGCACT GGTGGGTCTA CCTGACCGCG CTGTTGGTCG GTTTCTTCGG CATGGTGCCG TTCATCATCT ACGCCGAGAA GAAGCGTCGC ATGAAGCGCG TGCTGACCGG CGCGGTGGCG ACCCTGCTGG CCTGCGAACT GTTCTTCCTG GTCTTCGGTC ACAGCCTGGC CATGCTGGTG GTCGGCACGG TGGTGTTCTT CACTGCCTTC AACCTGCTCG AAGCCTCGCT GCCGTCGCTG GTCAGCAAGG TCTCGCCGGC CGGCGGCAAG GGCACGGCGA TGGGGGTGTA TTCCACCAGC CAGTTCCTCG GTGCGGCGCT GGGCGGCATC CTCGGCGGCT GGATGTTCCA GCACGGCGGG CTGAGCATGG TGTTCATCGG ATGCGCGGTG CTCGCTGCCC TCTGGCTGGC GATTGCTGTT ACCATGCGCG AACCGCCTTA TGTGACCAGC ATTCGCCTGC CGCTCGCGCC CGCCGCGCTG CAGGACGCGG TGCTGGTCCA GCGATTCAGG GCGTTGCCCG GTGTGGCAGA CGCCGTGGTG GTGGCCGAGG AGGCCGCCGC CTATGTCAAA GTGGATACCC AACAAGTGGA TCGCACCGCC CTCGAGCGCC TGGCCCAGGC CGCGCCGGGC GGATGCTGA
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Protein sequence | MHDSHTERMS GTETRAAVGL SLVFAFRMLG MFMVLPVLAT YGQDLAGATP ALIGLAIGAY GLTQAILQIP FGTISDRIGR RPVIVVGLLI FAAGAALAAN ADSIWGVIAG RVLQGAGAIS AAVMALLSDL TREQHRTKAM AMIGMSIGVS FAVAMVLGPV LTHLFGLHGL FWFTAGMALV GLLLILFFVP QPDHMTQHRE SSVARQALLP TLKHGDLLRL DAGILILHAI LMASFVALPL ALVHEGGLPK EQHWWVYLTA LLVGFFGMVP FIIYAEKKRR MKRVLTGAVA TLLACELFFL VFGHSLAMLV VGTVVFFTAF NLLEASLPSL VSKVSPAGGK GTAMGVYSTS QFLGAALGGI LGGWMFQHGG LSMVFIGCAV LAALWLAIAV TMREPPYVTS IRLPLAPAAL QDAVLVQRFR ALPGVADAVV VAEEAAAYVK VDTQQVDRTA LERLAQAAPG GC
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