Gene PA14_09080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_09080 
SymbolrpsM 
ID4382947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp769971 
End bp770327 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content58% 
IMG OID639323289 
Product30S ribosomal protein S13 
Protein accessionYP_788878 
Protein GI116052276 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.448669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTA TTGCAGGCGT CAACATTCCG GATAACAAGC ACACTGTTAT CTCGCTGACC 
TACATCTATG GTGTTGGTCG CACTACTGCT CAGAGCATCT GCGCAGCCAC CGGCGTAAAC
CCGGCTGCCA AGATCAAGGA CCTGAGCGAC GAGCAGATCG ATCAGCTGCG TAACGAAGTC
GCGAAGATCA CCACCGAAGG TGACCTGCGT CGCGAAATCA ACATGAACAT CAAGCGTCTG
ATGGACCTCG GTTGCTACCG CGGTCTGCGT CATCGTCGCG GTCTGCCGGT TCGCGGTCAG
CGTACCAAGA CCAACGCGCG TACCCGCAAG GGCCCGCGTA AGCCGATCCG CAAGTAA
 
Protein sequence
MARIAGVNIP DNKHTVISLT YIYGVGRTTA QSICAATGVN PAAKIKDLSD EQIDQLRNEV 
AKITTEGDLR REINMNIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIRK