Gene PA14_08540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_08540 
Symbol 
ID4383992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp729719 
End bp731062 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content62% 
IMG OID639323239 
Producthypothetical protein 
Protein accessionYP_788837 
Protein GI116054392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000156584 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000000118926 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTCCCCT CGAGCGAAGT CGAGGCCAAG AGGACCACGC TCAATCTGGA GCTTGAAAGC 
AACACCGATC GCCTCCTTCA GGAGAAAGAC GACCTCCTGC CGCAATCGGT CACCAATTCC
AGCGACGAAG GCACGCCTTT CGCTCAGGTA GAAGGCGCCT CCGACGACAA CACCGCCGAG
CAAGACTCGG ACAAGCCGGG CGCATCTGTA GCCGATGCCG ACACCAAGCC CGTCGATCCC
GAGTGGAAGA CCATCACCGT CGCCAGTGGC GATACGCTGT CGACCGTATT CACCAAGGCA
GGCCTTTCCA CCTCGGCCAT GCACGACATG CTGACCAGCA GCAAGGATGC CAAGCGCTTC
ACCCATCTGA AGGTCGGCCA GGAGGTCAAG CTCAAGCTCG ACCCCAAAGG AGAGCTGCAG
GCGCTGCGAG TCAAGCAGAG CGAACTCGAG ACCATCGGCC TGGACAAGAC CGACAAGGGC
TACTCCTTCA AACGCGAGAA GGCCCAGATC GACCTGCATA CCGCCTATGC CCATGGCCGC
ATCACCAGCT CGCTGTTCGT TGCCGGTCGT AACGCCGGCC TGCCCTATAA CCTGGTCACG
TCGCTGTCGA ACATCTTCGG CTACGACATC GACTTCGCCC TCGATCTGCG TGAAGGCGAC
GAGTTCGACG TGATCTACGA ACAGCACAAG GTCAACGGCA AGCAAGTGGC GACCGGCAAT
ATCCTCGCCG CCCGCTTCGT CAACCGTGGC AAGACCTACA CCGCCGTGCG CTATACCAAC
AAGCAGGGCA ATACCAGCTA CTACCGCGCC GACGGCTCCA GCATGCGCAA GGCATTCATC
CGTACGCCGG TGGATTTCGC CCGCATCAGC TCGCGCTTCT CCCTGGGCCG CCGCCACCCG
ATCCTGAACA AGATCCGCGC GCACAAGGGC GTCGACTACG CTGCCCCCAT CGGCACACCG
ATCAAGGCCA CCGGAGACGG CAAGATCCTC GAAGCCGGAC GCAAGGGGGG CTACGGCAAC
GCCGTGGTGA TCCAGCACGG CCAGCGCTAT CGGACCATCT ACGGACACAT GAGCCGCTTC
GCCAAGGGTA TCCGCGCCGG TACCAGCGTG AAGCAGGGCC AGATCATCGG TTACGTAGGC
ATGACGGGCC TGGCCACCGG CCCGCACCTG CACTACGAGT TCCAGATCAA TGGCCGTCAC
GTCGATCCGC TGAGCGCCAA GCTGCCCATG GCGGACCCGC TCGGTGGCGC AGATCGCAAG
CGCTTCATGG CGCAGACCCA GCCGATGATC GCGCGCATGG ATCAGGAGAA GAAAACCCTC
CTGGCCCTGA ACAAGCAGCG CTGA
 
Protein sequence
MFPSSEVEAK RTTLNLELES NTDRLLQEKD DLLPQSVTNS SDEGTPFAQV EGASDDNTAE 
QDSDKPGASV ADADTKPVDP EWKTITVASG DTLSTVFTKA GLSTSAMHDM LTSSKDAKRF
THLKVGQEVK LKLDPKGELQ ALRVKQSELE TIGLDKTDKG YSFKREKAQI DLHTAYAHGR
ITSSLFVAGR NAGLPYNLVT SLSNIFGYDI DFALDLREGD EFDVIYEQHK VNGKQVATGN
ILAARFVNRG KTYTAVRYTN KQGNTSYYRA DGSSMRKAFI RTPVDFARIS SRFSLGRRHP
ILNKIRAHKG VDYAAPIGTP IKATGDGKIL EAGRKGGYGN AVVIQHGQRY RTIYGHMSRF
AKGIRAGTSV KQGQIIGYVG MTGLATGPHL HYEFQINGRH VDPLSAKLPM ADPLGGADRK
RFMAQTQPMI ARMDQEKKTL LALNKQR