Gene PA14_08440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_08440 
Symbol 
ID4383983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp722204 
End bp723004 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID639323230 
Productputative short chain alcohol dehydrogenase 
Protein accessionYP_788828 
Protein GI116054383 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000000229698 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCGTT ATGCCCTGAT CACCGGCGCT TCCAGCGGTA TCGGCCTGGC CCTAGCCGAA 
GCCCTGGCCC GGCGCGGTCG CGCCCTGATC CTGGTGGCGC GCCAGCGCGA CGCGCTGGAG
AGCATCGCCT ATGAGCTGGC GCAGCGTTTC GGCGTGGAAG TGCTGTTCCG CACCTGCGAT
CTTTCCGAGC CGCTGCAACT GTCAGGGTTG TTGCACGAAC TGGAACAGGG CGAACGACAG
ATCGACCTGC TGGTTAACAA TGCCGGGATC GGTACCTCCG GCCCCTTCAT CGACCAGGAA
TGGGCGCGGG AACAGGAGCT GATCGAACTC AACATCCTGG CCCTGGCCCG CCTTTGCCAC
TCCCTCGGCG CCCGCATGGC GGCGCAGGGC GGTGGCCAGA TACTCAATAT CGCCTCGGTG
GCCGCCTTCC AGCCCGGCGC CTGGATGAGC AACTACTACG CCAGCAAGGC CTACGTCCTG
CACTTCTCGG AAGGCTTGCG GGAAGAACTG AAAGGGCGCG GCGTCAAGGT CTCGGTGCTG
TGCCCTGGGC CAACCCGTAC GGCATTCTTC CGGGAAGCCG GGATGCGGCT CGGCAGGCTC
GACCGGAGCA AGCTGATGAT GACCCCGGAG GAAGTCGCGC TGCTGGCCCT GCGCGGGCTG
GACAAGAACC GCGCCCTGAT CGTCCCCGGT TGGCGCAATC GCCTGCTGGC GCTGAGCCCA
CGCCTGGCGC CACGCTGGCT GGTGCGCCGA CTCGCCGCGC GGATCAACGC CTCGGCGGTA
CCCTCCGTCC CACGGGGTTG A
 
Protein sequence
MPRYALITGA SSGIGLALAE ALARRGRALI LVARQRDALE SIAYELAQRF GVEVLFRTCD 
LSEPLQLSGL LHELEQGERQ IDLLVNNAGI GTSGPFIDQE WAREQELIEL NILALARLCH
SLGARMAAQG GGQILNIASV AAFQPGAWMS NYYASKAYVL HFSEGLREEL KGRGVKVSVL
CPGPTRTAFF REAGMRLGRL DRSKLMMTPE EVALLALRGL DKNRALIVPG WRNRLLALSP
RLAPRWLVRR LAARINASAV PSVPRG