Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08300 |
Symbol | |
ID | 4383970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 707772 |
End bp | 711431 |
Gene Length | 3660 bp |
Protein Length | 1219 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323217 |
Product | putative phage-related protein, tail component |
Protein accession | YP_788815 |
Protein GI | 116054370 |
COG category | [S] Function unknown |
COG ID | [COG4733] Phage-related protein, tail component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0627181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000838912 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGA CCATCACGGG CCACAAGGGT GGCAGCAAGA AGCCGCGCCA GCCGGTGGAG ATGCCGGACT CGGTGCGCTC GATCGCGCGG GCGAAGATTC TCCTGGCACT GGGCGAAGGC GAGTTCGACG GTGGCGTCGA CGGCCGTTCG ATCTACCTGG ACGATACGCC GCTGCTGGCG GCGGACGGCT CGGTGAACTT CCCCGGAGTG ACCTGGGAGT TCCGTCCGGG CTCGGTGGAC CAGGAACACA TTGCCGGTGT GCCCGCCGTG GAAAACGAAC TGGCGGTCGG CGTCGAACTC AAGAGTGACG CGCCCTGGGT CCGCGCGGTG AACAACACCC AGCTCTCGGC GGTGCGCCTG CGCCTGTCCT GGCCGGCCAT CCAGCGCCAG CAGGAAAACG GTGACGTGGT CGGCTACCGC ATCGACTACG CGATCGACAT CGCCGTCGAC GGCGGTGCCT GGCAGGAAGC GCTGAAGGCT TCGCTGGACG ACAAGTCCAC CAGCCGCTAC GAGCGCTCCC ACCGTGTCGA CCTGCCGGAG GCGCGGAGCG GCTGGCAGGT GCGCGTGCGC CGCCTGACGC CGAACCAGAA CAACAACCGC GTCGCCGACA CCATGCGGGT GGAGGCGATC ACCGAGGTGA TCGACGCCAA GCTGCGCTAC CCGAACACCG CGCTGCTGTT CGTCGAGTTC GATGCCAGCC AGTTCCAGAG CATTCCGCAG ATATCGGTGG AAGCGCGCGG CCGGCGGGTG CGGGTGCCGA GCAACTACGA TCCGCAGACC CGTAGCTACA GCGGCACCTG GGACGGCTCG TTCAAGTCGG CCTGGACCAG CAACCCGGCC TGGCACTGGT ACGACATCGT GTTGCACAAG CGCTTCGGCC TCGGTCGGCG GATCGACGCG AGCATGGTCG ACAAGTGGTC GCTGTACCGC ATCGCCCAGT ACTGCGACCA GTCGGTGCCC GACGGCAAGG GCGGCCAGGA GCCGCGCTTC AGCTGCAACC TGTACCTGCA GAGTCGCGCC GAAGCCTGGA CCGTGCTGCG CGACCTGGCA GCGATCTTCC GCGGCATGTC CTACTGGTCC GGCGCGGAAA TGGTGGCGGT ATCCGACATG CCGGAGGACG AGGCCTACAC CTTCTCGCCG TCGAACACCG TGCGTGGCGA CGACGGCAGC CACTTCAACT ACAGCAGCAG CCGCCAGCGC GATCGCCACA CCCTGGCCCT GGTCAACTAC GACAATCCGG GCAACGGTTA CCAGAGCCAA CCGGTAGCGG TGAACAATGA CCGCGCGCAG CGCCGCTACG GCATCAGCCA GTTGGAGATC ACCGCGATCG GTTGCACCTC CGAGGGCGAG GCGCAGCGGC GTGGCCAGTG GGCGCTGCTG ACCGAGGAGC TGGAGCAGGA CGCGGTGACC TTCCGCACCG GCATGGATGG CCGTGGGCTG GCGCCGGGGA AGATCATCGC CGTAGCCGAC CCGGTCAAGT CCGGCAAGCA GATCGGCGGA CGCCTGAGCG CGGTGGATGG CCGCGCGCTG ACCCTCGACC GCGACGTCGA GGCCCGACCC GGCGATCGCC TGCTGGTCAA CCTGCCGAAC GGCAAGGCCG AGGCGCGCAG CGTCCAGTCG GTGGTAGGCC GCGTGCTGAC CGTGACCGCC GCCTATTCGG AGACGCCTCG GCCCCAGGGG CAGTGGGCGC TGCAGAGCAA CAGCCTGACC ACCCAGCGCT TCCGCATCAT GAGCATCACC CGGCCGGAGG ACAATCTTTT CGAGATCACC GCGCTGCAAC ACAACGCGAG CAAGTTCGAC GCCATCGACA ACGGTGCGCG CATCGAGCTG CCGCCGGTCA CCAGCATTCC GCCGGGCGTG CAGGCGCCGC CGCAGAACGT GCGGATCAAG GCTTTCACCA AGGTCGACCA GGGGTTGGCG GTGACCAGCC TGTCGGCCTC CTGGGATGCC GCGCCGAACG CGGTGGCCTA CGAGGCCGAA TGGCGCAAGG ACTCGGGCAA CTGGGTGCGG GTGCCGCGAA CCTCGGCGCT CGGTTTCGAC GTGCCGGGCA TCTATGCCGG TCGCTATCTG GTGCGGGTAC GCGCCTTGAA CGTGATGGAG GTCGGCTCGG TCTACGCCAG CAGTGTGGAG ACCGCTCTTG AGGGCAAGAC CACGCCGCCG CCGGCGCTGG CCTACCTGCG CTGCGTGGCC GGCCCCTGGC GCATCGGCCT GGAGTGGGGG TTCCCGGCCA GCGGCGCAGC GGACACCGCC TACACCGAGA TCCAGCAGTC CGCCACGCCC GGCGGCAGCG AGGAGACCGC ACGGGCGCTG GGCCTGTTCG CCTACCCAGG CAATACCCAC CTGGTATCGC CGATACCGGC CGGCGAACGG CTGGCGTTCC GCGGTCGCTT GATCGACCGT AGCGGCAACG TCGGCGCCTG GTCGAACTGG GTCACCGGCA CCAGCTCCAG CGACGCCAGC GAATACAACC AGTTGATCAC CCAGGAGTAC GTCGAGTCGG CGCTGGGCCA GCAATTCTTC TCCGATATCG AGCGGATGCA GGTGGATATC GGGGGCTTGC AGAAGCAGGT CGGCGACCTC GCCGACGTTT TGCTGTACGA CCCGACCAAG GTCTACGCGA AGAACGAAAT GGTGCGACAG GGGCAGCGGT TGTACCAGGC ACTGAAGGCT GTGCCGGCGA AGACGGCGCC GCCGAACGCG GCCTACTGGT CCGATATCGG CCAGTCGCTG GAAACTGCCA ACGGGCTGGC GCAGCAGGTG GCGAGCCATA CCGCTGAAAT CAGCGAACTC GACGGCAGGA TCGAAGCAGC GGCATCGAAT CTGGATGTGC TGCAAGCTGC CGCCCGCGGG GAACCGGCGA CCGGAGAGAA GGCGGATGCG CTGAAGGGCT GGGACACCAT TGCTCGAGCT GCCACCGAAG TCACCGTGCG GGCGAACGAG GACGAAGCGC AGGCGAAGCG GACGAGCTTG CTTGAGGCGT GGACCGGGAC GGCGGAGGGC AGGATCGCAA CCGTCGAGTC GGTCGTTGCG TCGAACAATG CTGTAACCGT CCAGCGGCTG GATCAGCTCA CCGGCCAGGT TGCGAGCAAC GCCTCGGCGA TCAGCACCGA ACAGACCGTC CGTGCCAACG CGGACAGCGC CCTGGGGCAG CGGGTGGATA CCGTCAGCGC GCGCACCGAT ACCAACGAGG CGAACATCCA GACCACCTCT CAAGCGGTTA CCTCGCTGGA TGGCAACGTC AAGGCGCTCT ACAGCGTGAA GCTCCAGGCG CATGCCAACG GGCAGAAGTA CGCCGCTGGC TGGCAACTGG GCTTCGACAG CGGTACGAGC GTGACGACCA TGGCGTTCCA GGCTGATCGG TTCCTCTGGT TCAACAGTTC CAGCGGGCAG ACAGTGGCGC CGGTTTCGAT CGTTGGCGGC CAGATGTTTA TCAACAACGC GATGATTCAG GAGGGCACCG TGTCGTTCCT GAAGATCGCC GATGACGTGC AGTCGACGAA CTATATTTCC GGATCGTCTG GCTGGAAGTT AGGCAAGAGT GGAAAATTCG AATTGAATGG TGCAGGGACT GGCTACTCCC TCAAACTCAC TCCGACTGGC ATGTACTTGA CGGATACAAC AACTGGGGTT GTTGTCGTCG AACTGGGATT GCTGTCGTGA
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Protein sequence | MNKTITGHKG GSKKPRQPVE MPDSVRSIAR AKILLALGEG EFDGGVDGRS IYLDDTPLLA ADGSVNFPGV TWEFRPGSVD QEHIAGVPAV ENELAVGVEL KSDAPWVRAV NNTQLSAVRL RLSWPAIQRQ QENGDVVGYR IDYAIDIAVD GGAWQEALKA SLDDKSTSRY ERSHRVDLPE ARSGWQVRVR RLTPNQNNNR VADTMRVEAI TEVIDAKLRY PNTALLFVEF DASQFQSIPQ ISVEARGRRV RVPSNYDPQT RSYSGTWDGS FKSAWTSNPA WHWYDIVLHK RFGLGRRIDA SMVDKWSLYR IAQYCDQSVP DGKGGQEPRF SCNLYLQSRA EAWTVLRDLA AIFRGMSYWS GAEMVAVSDM PEDEAYTFSP SNTVRGDDGS HFNYSSSRQR DRHTLALVNY DNPGNGYQSQ PVAVNNDRAQ RRYGISQLEI TAIGCTSEGE AQRRGQWALL TEELEQDAVT FRTGMDGRGL APGKIIAVAD PVKSGKQIGG RLSAVDGRAL TLDRDVEARP GDRLLVNLPN GKAEARSVQS VVGRVLTVTA AYSETPRPQG QWALQSNSLT TQRFRIMSIT RPEDNLFEIT ALQHNASKFD AIDNGARIEL PPVTSIPPGV QAPPQNVRIK AFTKVDQGLA VTSLSASWDA APNAVAYEAE WRKDSGNWVR VPRTSALGFD VPGIYAGRYL VRVRALNVME VGSVYASSVE TALEGKTTPP PALAYLRCVA GPWRIGLEWG FPASGAADTA YTEIQQSATP GGSEETARAL GLFAYPGNTH LVSPIPAGER LAFRGRLIDR SGNVGAWSNW VTGTSSSDAS EYNQLITQEY VESALGQQFF SDIERMQVDI GGLQKQVGDL ADVLLYDPTK VYAKNEMVRQ GQRLYQALKA VPAKTAPPNA AYWSDIGQSL ETANGLAQQV ASHTAEISEL DGRIEAAASN LDVLQAAARG EPATGEKADA LKGWDTIARA ATEVTVRANE DEAQAKRTSL LEAWTGTAEG RIATVESVVA SNNAVTVQRL DQLTGQVASN ASAISTEQTV RANADSALGQ RVDTVSARTD TNEANIQTTS QAVTSLDGNV KALYSVKLQA HANGQKYAAG WQLGFDSGTS VTTMAFQADR FLWFNSSSGQ TVAPVSIVGG QMFINNAMIQ EGTVSFLKIA DDVQSTNYIS GSSGWKLGKS GKFELNGAGT GYSLKLTPTG MYLTDTTTGV VVVELGLLS
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