Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_06290 |
Symbol | glcB |
ID | 4383851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 554958 |
End bp | 557135 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323055 |
Product | malate synthase G |
Protein accession | YP_788655 |
Protein GI | 116054211 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01345] malate synthase G |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0120712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.263623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAAC GCGTTCAAGT CGGTGGCCTG CAGGTCGCCA AAGTCCTGTT CGACTTCGTG AACAACGAAG CCATCCCCGG AACCGGCGTC TCTGCCGACA CGTTCTGGAC CGGTGCGGAG GCCGTGATCA ACGACCTGGC GCCGAAGAAT AAAGCCCTGC TCGCCAAGCG CGACGAACTC CAGGCCAAGA TCGACGGCTG GCACCAGGCT CGCGCCGGCC AGGCCCACGA CGCCGCTGCC TACAAGGCCT TCCTCGAGGA AATCGGCTAC CTGCTGCCCG AGGCGGAAGA CTTCCAGGCC GGCACCCAGA ACGTCGACGA CGAGATCGCC CGCATGGCCG GCCCGCAGCT GGTGGTGCCG GTGATGAATG CGCGCTTCGC CCTGAACGCC TCCAACGCCC GCTGGGGCTC GCTGTACGAC GCACTCTACG GCACCGACGT GATCAGCGAA GAAGGCGGCG CCGAGAAAGG CAAGGGCTAC AACAAGGTTC GCGGCGACAA GGTCATCGCC TTCGCTCGCG CCTTCCTCGA CGAGGCCGCG CCGCTGGAGT CCGGCTCCCA TGTCGACGCC ACTTCCTACA GCGTGAAGAA CGGCGCGCTG GTCGTCGCGC TGAAGAACGG CAGCGAAACC GGCCTGAAGA ACGCTGGCCA GTTCCTTGCC TTCCAGGGCG ACGCCGCCAA GCCGCAAGCG GTACTGCTCA AGCACAACGG CCTGCACTTC GAAATCCAGA TCGACCCGAG CAGCCCGGTC GGCCAGACCG ATGCCGCAGG CGTGAAGGAC GTGCTGATGG AAGCCGCCCT CACCACCATC ATGGACTGCG AGGACTCGGT CGCCGCGGTC GACGCCGACG ACAAGGTAGT GATCTACCGC AACTGGCTGG GCCTGATGAA AGGCGACCTG GCCGAGGAAG TCAGCAAGGG CGGCAGCACC TTCACCCGCA CCATGAACCC GGACCGCGTC TACACCAGGG CCGACGGTTC CGAACTGACC CTGCACGGCC GCTCGCTGCT GTTCGTGCGC AACGTCGGCC ACTTGATGAC CAACGATGCG ATCCTCGACA AGGACGGCAA CGAAGTGCCG GAAGGCATCC AGGACGGTCT GTTCACCAGC CTGATCGCCA TTCATGACCT GAACGGCAAC ACCAGCCGCA AGAACAGCCG CACCGGCAGC GTGTATATCG TCAAGCCGAA GATGCACGGT CCGGAAGAAG CCGCCTTCAC CAACGAGCTG TTCGGCCGCG TCGAGGACGT CCTCGGCCTG CCGCGCAACA CCCTGAAGGT CGGCATCATG GACGAGGAGC GCCGCACCAC CGTGAACCTG AAGGCCTGCA TCAAGGCGGC CAAGGATCGC GTGGTGTTCA TCAACACCGG CTTCCTCGAC CGCACCGGCG ACGAGATCCA CACCTCCATG GAAGCCGGCG CCGTGGTGCG CAAGGGCGCC ATGAAGTCGG AGAAGTGGAT CGGCGCCTAC GAGAACAACA ACGTCGACGT CGGCCTGGCC ACCGGCCTGC AAGGCAAGGC GCAGATCGGC AAGGGCATGT GGGCCATGCC CGACCTGATG GCCGCCATGC TCGAGCAGAA GATCGGCCAT CCGCTGGCCG GCGCCAACAC CGCCTGGGTC CCGTCGCCGA CCGCCGCGAC CCTGCACGCC CTGCATTACC ACAAGGTCGA CGTGTTCGCC CGCCAGGCCG AGCTGGCCAA GCGCACCCCG GCCTCGGTGG ACGACATCCT GACCATTCCG CTGGCGCCGA ACACCAACTG GACCGCGGAA GAGATCAAGA ACGAGGTGGA CAACAACGCC CAGGGCATCC TCGGCTATGT CGTCCGCTGG ATCGACCAGG GCGTCGGCTG CTCCAAGGTG CCGGACATCA ACGACGTCGG TCTGATGGAA GACCGCGCCA CCCTGCGCAT CTCCAGCCAG CTGCTGGCCA ACTGGCTGCG TCACGGCGTG ATCAGCCAGG AGCAGGTGGT CGAGAGCCTC AAGCGCATGG CCGTGGTGGT CGACCGGCAG AACGCCAGCG ACCCGTCCTA CCGGCCGATG GCGCCGAACT TCGACGACAA CGTCGCGTTC CAGGCCGCCC TGGAGCTGGT GGTGGAAGGC ACCCGGCAGC CGAACGGCTA TACCGAGCCG GTCCTGCATC GCCGCCGCCG TGAGTTCAAG GCGAAGAACG GGCTGTAG
|
Protein sequence | MTERVQVGGL QVAKVLFDFV NNEAIPGTGV SADTFWTGAE AVINDLAPKN KALLAKRDEL QAKIDGWHQA RAGQAHDAAA YKAFLEEIGY LLPEAEDFQA GTQNVDDEIA RMAGPQLVVP VMNARFALNA SNARWGSLYD ALYGTDVISE EGGAEKGKGY NKVRGDKVIA FARAFLDEAA PLESGSHVDA TSYSVKNGAL VVALKNGSET GLKNAGQFLA FQGDAAKPQA VLLKHNGLHF EIQIDPSSPV GQTDAAGVKD VLMEAALTTI MDCEDSVAAV DADDKVVIYR NWLGLMKGDL AEEVSKGGST FTRTMNPDRV YTRADGSELT LHGRSLLFVR NVGHLMTNDA ILDKDGNEVP EGIQDGLFTS LIAIHDLNGN TSRKNSRTGS VYIVKPKMHG PEEAAFTNEL FGRVEDVLGL PRNTLKVGIM DEERRTTVNL KACIKAAKDR VVFINTGFLD RTGDEIHTSM EAGAVVRKGA MKSEKWIGAY ENNNVDVGLA TGLQGKAQIG KGMWAMPDLM AAMLEQKIGH PLAGANTAWV PSPTAATLHA LHYHKVDVFA RQAELAKRTP ASVDDILTIP LAPNTNWTAE EIKNEVDNNA QGILGYVVRW IDQGVGCSKV PDINDVGLME DRATLRISSQ LLANWLRHGV ISQEQVVESL KRMAVVVDRQ NASDPSYRPM APNFDDNVAF QAALELVVEG TRQPNGYTEP VLHRRRREFK AKNGL
|
| |