| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_06170 |
|---|
| Symbol | |
|---|
| ID | 4383840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 545340 |
|---|
| End bp | 546311 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639323044 |
|---|
| Product | putative transmembrane sensor |
|---|
| Protein accession | YP_788644 |
|---|
| Protein GI | 116054200 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.202236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0195078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG ACGATCGTCA TTCGCCGGTA CGCGCGCGGG TGCTCGACGA AGCCATCGCC
TGGCAATTGC TGCTCGACTC CGGCGAAGCC CATCCCGACG ATCACCGCGC CTTCCACCGC
TGGTACGCGG CGCATCCCGA ACACGAACGC GCCTGGGAAC AGCTCGGCGG CCTCGACCGG
CACCTGGCGA GAGCCGCCAA CGGGCCGGCA CGCAACGCCC TGCTGTCCGG CAACGCACGC
TTCAAGCGCC GCCTGCGCCG GCTCGGCGGC AGCGCCCTGG GGCTAGTGCT GGCGCTGGGC
GTCGGGCTCG GCGTGGCCAA CCGCTACGTC CCGGTCCGCT ACCTGCTGGC CGATGCCTAC
AGCGCCACCG GCGAGCAGCG CGAGCTGACC CTCCCGGATG CCACCCATGT GCGCCTGAAC
AGCCGCAGCG CCATCGACGT CCGCTTCGAC GGCGAACGCC GCCAGGTCGT GCTACTGGCC
GGCGAGATCC TGGTGGAAAC CGCCCATGGC GACCCGCGCC CCTTCGTGGT CAGCAGCGCC
GATGGCGACA TGCGCGCCCT CGGCACGCGC TTCCTGGTGC GCCGCGAGGA ACCCGGCACG
CGCCTCACCG TGTTGCAGTC GGCGGTGGCC GCGCGCGCGG AAACGCTCAG CGAAGAGCGT
GTGATCAAGG AAGGCCAGCA GGTGCTGATC CTGCCGCAAG GCCTGCGGGC CAGCGAAGCG
GCCCCGGCCC TGGCCGGCGC CTGGGCACAA GGCATGCTGG TGGTGGAGAA CGCCCGGCTG
GCCGACCTGG TGGCGGAACT GGGGCGCTAT TCGCCGGCGC TGCTGCGGGT CGACCCGAGC
ATCGCCGACC TGCGCGTCAC CGGCAGTTTC CCGCTGAAGG ACACCCGCCT CGCCCTTCAG
GCTTTGGAGC CGAGCCTGCC GGTGCGCAGC GTGAGGCACA ACGCCTGGTG GTTCGAAGTG
GTGCCACGCT GA
|
|---|
| Protein sequence | MSADDRHSPV RARVLDEAIA WQLLLDSGEA HPDDHRAFHR WYAAHPEHER AWEQLGGLDR
HLARAANGPA RNALLSGNAR FKRRLRRLGG SALGLVLALG VGLGVANRYV PVRYLLADAY
SATGEQRELT LPDATHVRLN SRSAIDVRFD GERRQVVLLA GEILVETAHG DPRPFVVSSA
DGDMRALGTR FLVRREEPGT RLTVLQSAVA ARAETLSEER VIKEGQQVLI LPQGLRASEA
APALAGAWAQ GMLVVENARL ADLVAELGRY SPALLRVDPS IADLRVTGSF PLKDTRLALQ
ALEPSLPVRS VRHNAWWFEV VPR
|
|---|
| |