Gene PA14_06080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_06080 
SymbolcreD 
ID4383834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp538283 
End bp539641 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content67% 
IMG OID639323038 
Producthypothetical protein 
Protein accessionYP_788638 
Protein GI116054194 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0183043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA CGCTGGCCTA CAAGCTCGGC GCCATCGCCC TACTCATCCT GCTATTGCTG 
ATTCCCCTGT TGATGATCGA CGGCCTGATC CGCGATCGCC AGGAGGTTCG TGACGGCGTG
CTGCAGGATA TCGCCCGCAG CTCCAGCTAC AGCCAGCGCC TCACCGGCCC GCTGCTGGTG
GTGCCGTACC GCAGGACGGT GCGCGAGTGG GTCACCGAGG AGAAGACCGA GAAGCGCGTG
TTGCAGGAGC GCGAGCAGCG CGGCGAGCTG TACTTCCTGC CCGACCGCTT CGCCCTCGAC
GGGCAGATGC GCACCGAGCT GCGCTACCGT GGCATCTACC AGGCGCGCCT GTACCACGTC
GACAACAAGG TTGCCGGCTA CTTCCAGGTG CCTGCGCACT ATGGCATCGA AGAAGACTTG
GAGGACTACC AGTTCGAAAC GCCGTTCCTG GCGATGGGCA TCAGCGACAT CCGCGGCATC
GAGAATGCCC TGCGCCTGTC CCTCAACGGT GCCAGCGTCG ACTTCGAGCC GGGTAGCCGG
GTCGGCCTGC TCGGCAGCGG TGTGCACGCA CCGCTGCAAG GCGTCGACGG GCGCCAGGCG
CAGCGCCTGG AGTACGCCTT CGACCTGTCG TTGCTCGGCA GCGAGCGGCT GGACATCGTG
CCGGTGGGCC GCGACAGCCA GGTCATCCTG AAGGCCGACT GGCCGCACCC GAGCTTCGGC
GGCGAGTTCC TGCCCAGCGA GCGGGAGATC ACCGCCCAGG GCTTCACCGC GCGCTGGCAG
ACCAGCTTCT TCGCCACCAA CATGGAAGAG GCGCTGCGCA GTTGCGTGGA GGAGCAGCGC
TGCGACGGTT TCCAGGCGCG CGCCTTCGGC GTCGGCCTGG TCGATCCGGT GGACCAGTAC
CTGAAGGCCG ACCGCGCGAT CAAGTACGCG CTGCTGTTCA TCACCCTGAC CTTCGCCGGC
TTCTTCCTCT TCGAGGTGCT CAAGCGCCTG GCGGTACACC CGATCCAGTA CGCGCTGGTC
GGCCTGGCGC TGGCGTTCTT CTACCTGCTG CTGCTGTCGC TGGCCGAGCA TGTCGGCTTC
GAGCTGGCCT ACCTGGTCTC CGCCGGAGCC TGCGTCGGCC TGATCGGCTT CTACCTGTGC
TTCGTCCTGC GCAGCGTGGC CCGAGGACTG GGCTTCAGCG CCGGCCTGGC AGGGCTGTAC
GGCCTGCTCT ACGGCTTGCT GAGCGCGGAG GACTACGCCT TGCTGATGGG CTCGCTGCTG
CTGTTCGCGG TGCTTGCCGC GGTGATGGTG CTGACCCGCC GCCTGGACTG GTACGGGGTC
GGCCGCAAGG ACCTCCCGGC GGTGCCCGAC AGGGCCTGA
 
Protein sequence
MNRTLAYKLG AIALLILLLL IPLLMIDGLI RDRQEVRDGV LQDIARSSSY SQRLTGPLLV 
VPYRRTVREW VTEEKTEKRV LQEREQRGEL YFLPDRFALD GQMRTELRYR GIYQARLYHV
DNKVAGYFQV PAHYGIEEDL EDYQFETPFL AMGISDIRGI ENALRLSLNG ASVDFEPGSR
VGLLGSGVHA PLQGVDGRQA QRLEYAFDLS LLGSERLDIV PVGRDSQVIL KADWPHPSFG
GEFLPSEREI TAQGFTARWQ TSFFATNMEE ALRSCVEEQR CDGFQARAFG VGLVDPVDQY
LKADRAIKYA LLFITLTFAG FFLFEVLKRL AVHPIQYALV GLALAFFYLL LLSLAEHVGF
ELAYLVSAGA CVGLIGFYLC FVLRSVARGL GFSAGLAGLY GLLYGLLSAE DYALLMGSLL
LFAVLAAVMV LTRRLDWYGV GRKDLPAVPD RA