| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_05950 |
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| Symbol | dbpA |
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| ID | 4383824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 526330 |
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| End bp | 527706 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639323028 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_788628 |
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| Protein GI | 116054184 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.214385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCA CCGCTTTCTC CTCGCTGCCG CTTTCCGCGG ACCTCCTGGC CAATCTCGAC
TCCCTCGGTT ACCGGGAGAT GACGCCGATC CAGGCGCAGA GCCTGCCGCT GATCCTCCAG
GGCCACGACC TGATCGCCCA GGCCAAGACC GGCAGCGGCA AGACCGCGGC TTTCGGCCTC
GCCCTGCTCA GCCCGCTGAA CCCGCGCTAC TTCGGCTGCC AGGCGCTGGT GCTGTGCCCG
ACCCGCGAAC TGGCCGACCA GGTCGCCAAG GAGATCCGCC GGCTGGCCCG CGCCGCCGAC
AACATCAAGG TCCTGACCCT CTGCGGCGGC GTCCCCTACG GCCCGCAGGT GGCTTCGCTG
GAGCACGGCG CGCACGTGGT GGTCGGCACC CCGGGGCGCA TCCAGGAGCA CCTGCGCAAG
GGCACCCTGG TCCTCGACGG GCTCAATACC CTGGTCCTCG ACGAAGCCGA CCGGATGCTC
GACATGGGCT TCTACGACAG CATCGCCGAG ATCATCGGCC AGCTCCCCGA GCGCCGGCAG
ACCCTGCTGT TCTCCGCCAC CTACCCGGAC GGCATCGAGA AGCTGGCGAA GACCTTCATG
CGCGATCCGC GACAGGTGAA GGTCGAGTCG CTGCACGCCG ACAGCCAGAT CGAGCAGCGC
TTCTTCGAGA TCGATCCGAA GCAGCGCATG GACGCCGTGG TACGCCTGCT CCAGCATTTC
CGGCCGCAGT CCTGCGTGGC CTTCTGCCAG ACCCGCCAGC AGTGCCAGGA GCTGGCCGAC
GCACTGAAGG CGCAGCGGAT TTCCGCCCTG GCCCTGCACG GCGACCTGGA GCAGCGCGAG
CGCGACCAGG TCCTGACGGT GTTCGCCAAC CGCAGTTGCA ACGTACTGGT GGCCACCGAC
GTGGCCGCCC GCGGGCTGGA CATCGCCGCC CTGGAAACGG TGATCAACGT CGAGCTGGCG
CGCGACCCGG AGGTCCACAT CCATCGCATC GGACGCAGCG GTCGCGCCGG CGAGAAAGGC
CTGGCCCTGT CGCTGGTGGC GCCGGCCGAG GCCAGCCGTG CGCAGGCCAT CGAGGACCTG
CAGAAGCAGC CGCTGGCCTG GTACGCCCTC GGCCAGTTGA AGGCCAGCCC GGAGCCATTG
CTGCCGCCGA TGAGCACCCT GTGCATCGCC GGCGGACGCA AGGACAAGGT GCGCCCCGGC
GACCTGCTCG GTGCCCTCAC CGGCGACGCC GGGCTGCCCG GCAGCGCGGT GGGCAAGATC
GCCATCTTCG ACTTCCAGGC CTTCGTCGCC ATCGAGCGCG GCCTCGCCCA CCAGGCCCTC
AAGCGCCTGA GCGAAGGCAA GATCAAGGGG CGCTCGTTCA AGGTCCGCCT GCTGTAG
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| Protein sequence | MTSTAFSSLP LSADLLANLD SLGYREMTPI QAQSLPLILQ GHDLIAQAKT GSGKTAAFGL
ALLSPLNPRY FGCQALVLCP TRELADQVAK EIRRLARAAD NIKVLTLCGG VPYGPQVASL
EHGAHVVVGT PGRIQEHLRK GTLVLDGLNT LVLDEADRML DMGFYDSIAE IIGQLPERRQ
TLLFSATYPD GIEKLAKTFM RDPRQVKVES LHADSQIEQR FFEIDPKQRM DAVVRLLQHF
RPQSCVAFCQ TRQQCQELAD ALKAQRISAL ALHGDLEQRE RDQVLTVFAN RSCNVLVATD
VAARGLDIAA LETVINVELA RDPEVHIHRI GRSGRAGEKG LALSLVAPAE ASRAQAIEDL
QKQPLAWYAL GQLKASPEPL LPPMSTLCIA GGRKDKVRPG DLLGALTGDA GLPGSAVGKI
AIFDFQAFVA IERGLAHQAL KRLSEGKIKG RSFKVRLL
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