Gene PA14_05880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_05880 
Symbol 
ID4383820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp520909 
End bp522240 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content73% 
IMG OID639323024 
Productputative membrane-bound protease 
Protein accessionYP_788624 
Protein GI116054180 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGC CGTGCCGGCT CGCGCTGGCG CTGTTGCTGT GCTTCGCCGG CCCGGCCTGT 
CTCGCGGCCT CCGGACCGGT TCGGGTGCTC TCGGTGGATG GTGCGATCGG CCCGGCCAGC
GCCGATTACC TGGTGCGCGG CATCGAGCGT GCCGCCGAGG ACGGCGCGCA ACTGGTGGTG
CTGGAACTGG ACACGCCCGG CGGCCTGGAC GCATCGATGC GGCGCATCGT CAAGGCGATC
CTCGCCAGCC AGGTGCCGGT CGCCGGTTTC GTCGCGCCCA GCGGGGCGCG GGCGGCGAGC
GCCGGCACCT ACATCCTGTA TGCCTGCCAT ATCGCGGCGA TGGCGCCGGG CACCAACCTC
GGCGCTGCCA CCCCGGTGCG CCTGGGGACG CCGGACAAGC CCGCAGAGAA GCCCCCGGCG
CGGGACGCCG AACCCATGGC GCGCAAGCAG GTCAACGACG CCGCCGCCTA TATCCGTGGC
CTCGCGCAAC TGCGCGGGCG CAACGTCGAG TGGGCCGAGC GCGCGGTGCG CGAGGCGGTC
AGCCTGGCGG CGCACGAGGC GGCGGCGCAG AGGGTGATCG ACCTGCAGGC CCGCGACCTG
CCCGACCTGC TGCGCCAGCT CGACGGCCGC AGCCTGCGCG TCGGCGAGCG CGCGCTGACC
CTGGCTACCG CCGGCGCCAC GGTCGAGCGC CAGGCACCGG ACTGGCGCGC GCGGTTGCTG
GCGGTGCTCA CCGATCCCAG CGTGGCGCTG ATCCTGATGA TGATCGGCAT CTACGGGCTG
ATCTTCGAAC TGGCCAATCC CGGCATGGCG CTGCCCGGCG TGCTCGGCGG CATCTGCCTG
CTGCTCGGCC TGTACGCCCT GCAGATGCTG CCGCTCAACT ACGCCGGGCT GGCGCTGATC
GCGCTGGGCC TGGCGTTCAT GGTGGGCGAG GCGTTCGTCG CCAGCTTCGG CGTGCTCGGC
ATCGGCGGAA TCGTCTCGTT CGTGGTCGGC GCGCTGATCC TGATCGATAC CGAGGTGCCC
GGCTACGGCA TTCCGCCCGG CCTGGTGGTG GCCCTGGCGT TGCTCAGCGC CGCGCTGATC
GTCGGTCTGC TGGGCATGGC CCTGCGTACT CGCCGGCAAG CGGTGGTAAG TGGCACCGCC
GGATTGGTCG GCAGCCTGGC GACGGTGGCG GCGGTGGATT CCGAACAACC CTGCGCAGGC
TGGGTGCTGC TCCAGGGCGA GCGCTGGCGG GTGCTCGCCG CGCGGCCGCT GGCGGTGGGC
CAGCCGGTCT GGGTGCTGGC GCGCAAGGGC CTGCTCCTGG AAGTCGCGCT GGCCGATGAA
GGAGGTGGAT GA
 
Protein sequence
MRMPCRLALA LLLCFAGPAC LAASGPVRVL SVDGAIGPAS ADYLVRGIER AAEDGAQLVV 
LELDTPGGLD ASMRRIVKAI LASQVPVAGF VAPSGARAAS AGTYILYACH IAAMAPGTNL
GAATPVRLGT PDKPAEKPPA RDAEPMARKQ VNDAAAYIRG LAQLRGRNVE WAERAVREAV
SLAAHEAAAQ RVIDLQARDL PDLLRQLDGR SLRVGERALT LATAGATVER QAPDWRARLL
AVLTDPSVAL ILMMIGIYGL IFELANPGMA LPGVLGGICL LLGLYALQML PLNYAGLALI
ALGLAFMVGE AFVASFGVLG IGGIVSFVVG ALILIDTEVP GYGIPPGLVV ALALLSAALI
VGLLGMALRT RRQAVVSGTA GLVGSLATVA AVDSEQPCAG WVLLQGERWR VLAARPLAVG
QPVWVLARKG LLLEVALADE GGG