Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_05420 |
Symbol | |
ID | 4383806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 477829 |
End bp | 478623 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639322990 |
Product | putative transcriptional regulator |
Protein accession | YP_788590 |
Protein GI | 116054147 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCC TGCAACACGC GCGGATCGGC GCCTCCCTCG AGGTCGCCAG CGCCAGCCTG GCCGGGCACC GCTTCGAGAA GCACAGCCAC GACGAGTTCG TCATCAGCGC CAACCTCTGC GGATTGGAAG ATGTCTGGCT GGATGGCCGT ACCTTCCAGG CCGACAGCGG CGACCTGACC CTCTACAACC CGGGGCAGAT CCAGGGCGGC GGCGTCCGCG ACGGCCAGCC CTGGCGCTTC GCCAGCCTCT ATCTGCCTGC CGCCGAACTG GCGAGCAGCC TGGATCTTTC CTCCGTCGAG TTCGACCGCC CGCTGCTGCG CAATCCGGCG CTGGGCCGCG AGTTGGCCGC CAGCATCGAA GCCTTGCTGG CCAGCGACCG CTTCGCCCGC GAACGGGGCG AGGAGCGCCT GCTGGAGTTC CTCGGCCGCC TGCTGGCGGC GAGCGGCACC CGCCTGCCGC AGAGGGCCGA TCCTGGGCGC CCGGCTGTCG CCCGCCTGCA GGCGCTGCTC GCCGAGCGCC TGGCCGAGCC GCCGGACCTG GATGGGATGG CGGAGCAGGT GGGCCTGTCG AAATACCACC TGCTGCGGGC GTTCAAGAAG GCCACCGGGC TCAGCCCGCG ACAGTGGAGC ATGCAATTGC GCACCCGCCG CGCCCTCGGC CTGTTACGCC GTGGCCTGGC GGTGGGCGAG GTGGCCCACG CCCTGGGCTT CGCCGACCAG AGCCACCTGA CCCGTTACTT CACCAGCGCC TACGGCATTT CGCCGGGCCG CTACCAGCGC GCTGTGCGCG GCTGA
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Protein sequence | MAGLQHARIG ASLEVASASL AGHRFEKHSH DEFVISANLC GLEDVWLDGR TFQADSGDLT LYNPGQIQGG GVRDGQPWRF ASLYLPAAEL ASSLDLSSVE FDRPLLRNPA LGRELAASIE ALLASDRFAR ERGEERLLEF LGRLLAASGT RLPQRADPGR PAVARLQALL AERLAEPPDL DGMAEQVGLS KYHLLRAFKK ATGLSPRQWS MQLRTRRALG LLRRGLAVGE VAHALGFADQ SHLTRYFTSA YGISPGRYQR AVRG
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