Gene PA14_05420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_05420 
Symbol 
ID4383806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp477829 
End bp478623 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID639322990 
Productputative transcriptional regulator 
Protein accessionYP_788590 
Protein GI116054147 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC TGCAACACGC GCGGATCGGC GCCTCCCTCG AGGTCGCCAG CGCCAGCCTG 
GCCGGGCACC GCTTCGAGAA GCACAGCCAC GACGAGTTCG TCATCAGCGC CAACCTCTGC
GGATTGGAAG ATGTCTGGCT GGATGGCCGT ACCTTCCAGG CCGACAGCGG CGACCTGACC
CTCTACAACC CGGGGCAGAT CCAGGGCGGC GGCGTCCGCG ACGGCCAGCC CTGGCGCTTC
GCCAGCCTCT ATCTGCCTGC CGCCGAACTG GCGAGCAGCC TGGATCTTTC CTCCGTCGAG
TTCGACCGCC CGCTGCTGCG CAATCCGGCG CTGGGCCGCG AGTTGGCCGC CAGCATCGAA
GCCTTGCTGG CCAGCGACCG CTTCGCCCGC GAACGGGGCG AGGAGCGCCT GCTGGAGTTC
CTCGGCCGCC TGCTGGCGGC GAGCGGCACC CGCCTGCCGC AGAGGGCCGA TCCTGGGCGC
CCGGCTGTCG CCCGCCTGCA GGCGCTGCTC GCCGAGCGCC TGGCCGAGCC GCCGGACCTG
GATGGGATGG CGGAGCAGGT GGGCCTGTCG AAATACCACC TGCTGCGGGC GTTCAAGAAG
GCCACCGGGC TCAGCCCGCG ACAGTGGAGC ATGCAATTGC GCACCCGCCG CGCCCTCGGC
CTGTTACGCC GTGGCCTGGC GGTGGGCGAG GTGGCCCACG CCCTGGGCTT CGCCGACCAG
AGCCACCTGA CCCGTTACTT CACCAGCGCC TACGGCATTT CGCCGGGCCG CTACCAGCGC
GCTGTGCGCG GCTGA
 
Protein sequence
MAGLQHARIG ASLEVASASL AGHRFEKHSH DEFVISANLC GLEDVWLDGR TFQADSGDLT 
LYNPGQIQGG GVRDGQPWRF ASLYLPAAEL ASSLDLSSVE FDRPLLRNPA LGRELAASIE
ALLASDRFAR ERGEERLLEF LGRLLAASGT RLPQRADPGR PAVARLQALL AERLAEPPDL
DGMAEQVGLS KYHLLRAFKK ATGLSPRQWS MQLRTRRALG LLRRGLAVGE VAHALGFADQ
SHLTRYFTSA YGISPGRYQR AVRG