Gene PA14_03730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_03730 
Symbol 
ID4383691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp334920 
End bp336098 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content64% 
IMG OID639322855 
Productputative fatty acid desaturase 
Protein accessionYP_788455 
Protein GI116054013 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00111246 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGTTCA ACGGTTTTCT CGACCTGTCG CCCTGGCAAC TGGTGGCAGT TACCCTGGTG 
CTGACGCATA TCACCATCGT CAGCGTGACC GTCTACCTGC ATCGCTATTC CGCCCACCGT
GCACTCGACC TGCACCCTGC GTTGCAGCAC TTCTTCCGTT TCTGGTTGTG GTTGACCACA
GGGATGAACA CGCGCGAATG GACCGCGATC CACCGTAAGC ACCATGCCAA GTGCGAGACC
GTCGAGGATC CGCACAGCCC GGTGCACAAG GGCCTGTTCA CCGTCCTGCG CGCAGGCGCG
GAGCTGTACA AGGCCGAGGC GAAGAACCAG GACACCCTGC GCATCTACGG CAAGAACTGC
CCGGACGACT GGATCGAGCG CAATCTCTAC TCGCGCTTCC CGATCGGCGG CGTGGTGCTG
ATGGCGCTCA TCGACCTGGC CCTGTTCGGC GCCCTTGGCC TGACCGTCTG GGCCGTGCAG
ATGGCATGGA TTCCGTTCTG GGCCGCCGGC GTGGTCAACG GCCTCGGCCA CGCGGTCGGC
TATCGCAACT TCGAATGCCG CGACGCCGCC ACCAACCTGG TGCCCTGGGG CATCCTCATC
GGTGGCGAAG AGCTGCACAA CAACCACCAC ACCTACCCGA ACTCGGCCAA GCTGTCGGTG
AAGAAGTGGG AATTCGACCT GGGCTGGGCC TGGATCAAGC TGTTCAGTTT CCTGCGCCTG
GCCAGGGTCG CCCGGGTTGC GCCGATCGCC CATCGGGTCG AAGGCAAGCA CAGCCTGGAC
ATGGATACCG CCATGGCGAT CCTCAACAAC CGCTTCCAGA TCATGGCGCA GTACCGCAAG
CTGGTGATCG CGCCGTTGGT CAAACAGGAA GTGGCCAAGG CCGACGAGTC GGTGCGCCAC
CTGTTCCGCC GCGCCAAGCG CCTGCTGTCG CGCGAGACCA GCCTGCTGCA GGACCGCCAC
CATGTGCGCA TCGACTCGAT GCTCGCCCAC AGCCAGGCGC TGAAGGTGAT CTACGAGAAG
CGCCTGGCGT TGCAGCAGAT CTGGGCCAAG ACCAGCGCCA ACGGCCACGA CATGCTGGCG
GCGATCAAGG ACTGGGTGCA TGAGGCGGAA GCCAGCGGTA TCCAGTCGCT GAAGGAGTTC
GCCGCGCAAC TGAAGACCTA CTCGCTGCGT CCCGCCTGA
 
Protein sequence
MWFNGFLDLS PWQLVAVTLV LTHITIVSVT VYLHRYSAHR ALDLHPALQH FFRFWLWLTT 
GMNTREWTAI HRKHHAKCET VEDPHSPVHK GLFTVLRAGA ELYKAEAKNQ DTLRIYGKNC
PDDWIERNLY SRFPIGGVVL MALIDLALFG ALGLTVWAVQ MAWIPFWAAG VVNGLGHAVG
YRNFECRDAA TNLVPWGILI GGEELHNNHH TYPNSAKLSV KKWEFDLGWA WIKLFSFLRL
ARVARVAPIA HRVEGKHSLD MDTAMAILNN RFQIMAQYRK LVIAPLVKQE VAKADESVRH
LFRRAKRLLS RETSLLQDRH HVRIDSMLAH SQALKVIYEK RLALQQIWAK TSANGHDMLA
AIKDWVHEAE ASGIQSLKEF AAQLKTYSLR PA