| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01580 |
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| Symbol | gabP |
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| ID | 4384246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 143881 |
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| End bp | 145308 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639322686 |
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| Product | gamma-aminobutyrate permease |
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| Protein accession | YP_788287 |
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| Protein GI | 116053850 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.683743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.83882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAG TCGTACTGGC TTCACAACTG CCGAACAAGC GCAACGCCTC GCTCGCGCCC
GGCCTGAAAC AACGCCACGT CACCATGCTG TCGATCGCCG GGGTGATCGG CGCCGGCCTG
TTCGTCGGCT CCGGCCATGC CATCGCCGCC GCCGGCCCGG CCGCCCTGCT CGCCTACCTG
ATCGCCGGCA CCCTGGTGGT GCTGGTCATG CGCATGCTCG GCGAAATGGC GGTCGCCTCC
CCCGATACCG GTTCCTTCTC CACCTACGCC GATCGCTCCA TCGGCCGCTG GGCCGGTTTC
ACCATCGGCT GGCTCTACTG GTGGTTCTGG GTGCTGGTGA TCCCCCTCGA AGCGATCGCC
GCCGCGGCCA TCCTCAACGC CTGGTTCCCG GCCATCGACA CCTGGATCTT CGCCCTCGCG
GTGACCTTCC TGCTCACCGT CACCAACCTC TTCAGCGTGG CCCGCTACGG CGAGTTCGAA
TTCTGGTTCG CGCTGCTCAA GGTGATCGCC ATCATCGCCT TCATCGTGCT CGGCGCGGTG
GCCATCGTCG GCGGCCTGCC GGAACGCGAG GTCAGCGGCC TGTCCAGCCT GATGGCGAGC
CACGGCGGCT TCGTGCCGAA CGGCTACGGC GCGGTGCTCG GCGCCCTGCT GACGACCATG
TTCAGCTTCA TGGGTACCGA GATCGTCACC ATCGCCGCCG CCGAGTCCAA GGACCCGGCG
AAGCAGATCA CCCGCGCCAC CAACTCGGTG ATCTGGCGGA TCGGCCTGTT CTACCTGGTG
TCGATCTTCA TCGTGATCTC CATCGTGCCG TGGAACGACC CGCTGCTGAT CCAGGTCGGC
TCCTACCAGC GCGCCCTGGA GCTGCTGGAC ATCCCGCACG CCAAGCTGAT CGTCGACCTG
GTGGTACTGG TCGCCGTGGC CAGCTGCCTG AACTCGGCGA TCTACACCTC GTCGCGGATG
GTCTTCTCCC TGGCCAAGCG CGGCGACGCC CCGAGCGTGC TCAAGCTGAC CAACACCGCC
CACGTACCAC GCCCGGCGGT GCTGGCCAGC ACCGCGGTGG GCTTCCTCAC CACCATCGTC
AACTACTTCG CACCGGAGAA GGTCTTCACC TTCCTCCTCG CCAGCTCCGG CGCCGTGGCG
CTACTGGTGT ACCTGGTGAT CGCCGTGGCC CAGTTGCGCA TGCGCAAGCA ATTGCAGGTC
AGCGGCCAGC CCATCGAGTT CCGCATGTGG CTGTATCCCT GGCTGACCTG GGCGGTGATC
CTGTTCATCG TCGCCGCGCT GAGCATCATG CTGATCATGC CGGAGCACCG TCACGAGGTG
TTCGCCACCG CTCTGCTGAC GATCTTCACC GTCTGCCTCG GGCTGCTCAA CGCGCGACGC
AAGCCGCGCC TCGGCGAGGA CTACGCCGGG AAGACGGCGC GGGTCTGA
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| Protein sequence | MSKVVLASQL PNKRNASLAP GLKQRHVTML SIAGVIGAGL FVGSGHAIAA AGPAALLAYL
IAGTLVVLVM RMLGEMAVAS PDTGSFSTYA DRSIGRWAGF TIGWLYWWFW VLVIPLEAIA
AAAILNAWFP AIDTWIFALA VTFLLTVTNL FSVARYGEFE FWFALLKVIA IIAFIVLGAV
AIVGGLPERE VSGLSSLMAS HGGFVPNGYG AVLGALLTTM FSFMGTEIVT IAAAESKDPA
KQITRATNSV IWRIGLFYLV SIFIVISIVP WNDPLLIQVG SYQRALELLD IPHAKLIVDL
VVLVAVASCL NSAIYTSSRM VFSLAKRGDA PSVLKLTNTA HVPRPAVLAS TAVGFLTTIV
NYFAPEKVFT FLLASSGAVA LLVYLVIAVA QLRMRKQLQV SGQPIEFRMW LYPWLTWAVI
LFIVAALSIM LIMPEHRHEV FATALLTIFT VCLGLLNARR KPRLGEDYAG KTARV
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