Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_01010 |
Symbol | |
ID | 4383501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 98900 |
End bp | 99418 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639322639 |
Product | hypothetical protein |
Protein accession | YP_788240 |
Protein GI | 116053803 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGCA CTACCAGCAG TCAGAAGTTC ATCGCCAGGA ACCGGGCGCC ACGCGTGCAG ATCGAGTACG ACGTGGAGCT GTACGGTGCC GAGAAGAAGG TCCAGTTGCC CTTCGTCATG GGCGTCATGG CCGACCTCGC CGGCAAGCCC GCCGAACCCC AGGCGGCGGT CGCCGACCGC AAGTTCCTGG AGATCGACGT GGACAACTTC GATGCCCGGC TGAAGGCGAT GAAGCCGCGG GTGGCCTTCA ACGTACCGAA CGTGCTGACC GGCGAAGGCA ACCTGAGCCT GGACATCACC TTCGAGAGCA TGGACGACTT CAGCCCCGCC GCGGTGGCGC GCAAGGTCGA TTCGCTGAAC AAGCTGCTTG AGGCGCGTAC CCAGCTGGCC AACCTGCTGA CCTACATGGA TGGCAAGACC GGCGCCGAGG AAATGATCAT GAAGGCGATC AAGGACCCGG CCCTGCTTCA GGCCCTGGCC AGCGCGCCGA AGCCCAAAGA CGACGAGCCG CAGGCGTAA
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Protein sequence | MGSTTSSQKF IARNRAPRVQ IEYDVELYGA EKKVQLPFVM GVMADLAGKP AEPQAAVADR KFLEIDVDNF DARLKAMKPR VAFNVPNVLT GEGNLSLDIT FESMDDFSPA AVARKVDSLN KLLEARTQLA NLLTYMDGKT GAEEMIMKAI KDPALLQALA SAPKPKDDEP QA
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