Gene PA14_00550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_00550 
Symbol 
ID4381737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp55575 
End bp56984 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content70% 
IMG OID639322599 
Producthypothetical protein 
Protein accessionYP_788200 
Protein GI116053765 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0250309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0752819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTAC ACCGGGGCGG AGAACCCGAT GGATACCGGC GGCAGCGCCG GCCTCATGGC 
GGACGGCGTA CCACCGTGCA GGCACCTCGG GGTCGTCTGC TGCTATGGTG CGCACAGGCA
CGTCGCCATC CTCTCTCCCG GCGAATGGAA TCGAGCATGA CGCTTTCCCT GGATCTGTTG
TTGAGCCTGT GCACGGCCCT GGCCATCGGC CTTCTGATCG GCGCCGAGCG CGGCTGGCAA
GAGCGCGACC ACGAAGATGC GCGGCAGATC GCCGGAATCC GCACCTTCAG CCTGGCCGGC
CTGCTCGGCG GCTTCGCCAC CCTGCTCGCG GGCGAACTGG GCAGCGCAGT CTGGGTAGCC
TTGCTGCTGG CCCTCGCGGC GCTGGCCGTG GCCGGCTACG TGAGCGACGT CAGGCGTGGC
GGCGACCAGG GCATGACCAC CGAGATCGCC CTACTGATGA CCTTCCTCCT CGGCAGCCTC
GCCCTCACCG AACAGCGCCT GCTGGCTGCC GCCGGCGGCA TCGTGCTGAC CCTGCTGCTG
AGCCTCAAGG ACAAGCTCCA CGCCCTGCTG AAGCGCCTGA CCGCCGAGGA ACTGTCGGGC
ACCCTCAAGC TGCTGTTCAT CTCCGTGGTC CTGCTGCCGG TGCTGCCCAA CCAGGGCTAC
GGTCCCTGGG CGTTCTTCAA TCCCTACCTG ACCTGGTGGA TGGTGGTGCT GATCGCCGCC
CTCGGTTTCT CCGCCTACCT GGCCATCCGC CTGATCGGCT CGCGCAAGGG CCTGTTGCTG
ACCGCGGTGC TCGGCGGCCT GGTGTCCTCC ACGGTGATGA CCCTGACCCT GGCGCGCCTG
CGCGAGCGCA TGCCCGACGC CCTGTTGGCG TGCGCCCTGC TGGCGACCTC GGCGCTGATG
TTCCCGCGCA TCCTCGTCGA GATCGGCGCG ATCCACCCGG CCTTGCTGAA GGAACTGGTC
CTGCCATTCG CCGCCACCAC CCTCGTCTAC CTTGGCGGCA CGCTGTTCCA CGCCCTGCGC
GGCGGCCGCG CCAGCCAGGA GGCGCCCGAC GAGCCAGGCC TGCGCAACCC CTTCGAACTG
CTCCCGGCCC TGCGCTTCGC CGCCCTGCTG AGCGCGATCC TGCTGTTGGT GGAGGTCGGC
CGGCGGCTGT TCGGCGATGC CGGCATCTAT GCGGTCGCGC TGCTCTCCGG CCTCGCCGAC
GTCGACGCGA TCACCCTGTC CCTGGCCCGC GCGGCGCAGG GCGAACTCGA TCCAGGCGTG
GCCAGCCGCG GCATCGCCCT TGCCGCCCTG AGCAACAGCC TGGTCAAGGC CGGCCTGATC
GTGCTGGTGG GCGGCAAGCG GCTGGCCCTG CAAACGCTAC CCTTCAGCCT GGCGGGGCTG
CTGGTAGGAG CGCTGCTGAT CCTGCTGTGA
 
Protein sequence
MRLHRGGEPD GYRRQRRPHG GRRTTVQAPR GRLLLWCAQA RRHPLSRRME SSMTLSLDLL 
LSLCTALAIG LLIGAERGWQ ERDHEDARQI AGIRTFSLAG LLGGFATLLA GELGSAVWVA
LLLALAALAV AGYVSDVRRG GDQGMTTEIA LLMTFLLGSL ALTEQRLLAA AGGIVLTLLL
SLKDKLHALL KRLTAEELSG TLKLLFISVV LLPVLPNQGY GPWAFFNPYL TWWMVVLIAA
LGFSAYLAIR LIGSRKGLLL TAVLGGLVSS TVMTLTLARL RERMPDALLA CALLATSALM
FPRILVEIGA IHPALLKELV LPFAATTLVY LGGTLFHALR GGRASQEAPD EPGLRNPFEL
LPALRFAALL SAILLLVEVG RRLFGDAGIY AVALLSGLAD VDAITLSLAR AAQGELDPGV
ASRGIALAAL SNSLVKAGLI VLVGGKRLAL QTLPFSLAGL LVGALLILL