Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_00280 |
Symbol | hemF |
ID | 4384742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 25757 |
End bp | 26674 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639322578 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_788179 |
Protein GI | 116053744 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.477574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACC GTATCGCCGC TGTCAAAACC TACCTGCTCG ACCTGCAAGA CCGCATCTGC GCCGCCCTCG AGGCGGAGGA CGGCAAGGCC CGCTTCGCCG AGGACGCCTG GGAGCGTCCG GCCGGTGGCG GCGGACGGAC GCGGGTAATC GGCGACGGCG CATTGATCGA GAAGGGCGGG GTGAATTTTT CCCACGTCTT CGGCGATAGC CTGCCGCCCT CGGCCAGCGC CCATCGGCCG GAACTGGCCG GGCGCGGTTT CCAGGCGCTC GGCGTGTCGC TGGTGATCCA TCCGGAAAAC CCCCACGTGC CGACTTCCCA TGCCAACGTG CGTTTCTTCT GCGCCGAGAA GGAAGGCGAG GAGCCGGTCT GGTGGTTCGG CGGCGGCTTC GACCTGACCC CCTACTACGC CCACGAGGAA GACTGCGTGC ATTGGCACCG GGTCGCTCGC GACGCCTGCG CGCCGTTCGG CGCGGACGTC TATCCGCGCT ACAAGGAATG GTGCGACCGC TACTTCCATC TCAAGCACCG CAACGAGCCG CGCGGCATCG GCGGCCTGTT CTTCGACGAC CTCAACCAGT GGGACTTCGA CACCTGCTTC GCCTTCATCC GCGCTATCGG CGACGCCTAT ATCGACGCCT ACCTGCCGAT CGTCCAGCGC CGCAAGCACA CGCCGTTCGA TGAACGGCAG CGAGAGTTCC AGGCCTATCG TCGCGGTCGC TACGTGGAGT TCAACCTGGT CTTCGATCGT GGCACCCTGT TCGGCCTGCA GTCCGGCGGC CGTACCGAAT CGATCCTGAT GTCGTTGCCG CCGCAGGTGC GCTGGGGCTA TGACTGGAAA CCCGAGCCGG GCAGCGAGGA AGCGCGCCTG ACCGAGTATT TCCTCGCCGA CCGCGATTGG CTCGCCGGCC AGCCCTGA
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Protein sequence | MTDRIAAVKT YLLDLQDRIC AALEAEDGKA RFAEDAWERP AGGGGRTRVI GDGALIEKGG VNFSHVFGDS LPPSASAHRP ELAGRGFQAL GVSLVIHPEN PHVPTSHANV RFFCAEKEGE EPVWWFGGGF DLTPYYAHEE DCVHWHRVAR DACAPFGADV YPRYKEWCDR YFHLKHRNEP RGIGGLFFDD LNQWDFDTCF AFIRAIGDAY IDAYLPIVQR RKHTPFDERQ REFQAYRRGR YVEFNLVFDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK PEPGSEEARL TEYFLADRDW LAGQP
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