Gene PA14_00280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_00280 
SymbolhemF 
ID4384742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp25757 
End bp26674 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID639322578 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_788179 
Protein GI116053744 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.477574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC GTATCGCCGC TGTCAAAACC TACCTGCTCG ACCTGCAAGA CCGCATCTGC 
GCCGCCCTCG AGGCGGAGGA CGGCAAGGCC CGCTTCGCCG AGGACGCCTG GGAGCGTCCG
GCCGGTGGCG GCGGACGGAC GCGGGTAATC GGCGACGGCG CATTGATCGA GAAGGGCGGG
GTGAATTTTT CCCACGTCTT CGGCGATAGC CTGCCGCCCT CGGCCAGCGC CCATCGGCCG
GAACTGGCCG GGCGCGGTTT CCAGGCGCTC GGCGTGTCGC TGGTGATCCA TCCGGAAAAC
CCCCACGTGC CGACTTCCCA TGCCAACGTG CGTTTCTTCT GCGCCGAGAA GGAAGGCGAG
GAGCCGGTCT GGTGGTTCGG CGGCGGCTTC GACCTGACCC CCTACTACGC CCACGAGGAA
GACTGCGTGC ATTGGCACCG GGTCGCTCGC GACGCCTGCG CGCCGTTCGG CGCGGACGTC
TATCCGCGCT ACAAGGAATG GTGCGACCGC TACTTCCATC TCAAGCACCG CAACGAGCCG
CGCGGCATCG GCGGCCTGTT CTTCGACGAC CTCAACCAGT GGGACTTCGA CACCTGCTTC
GCCTTCATCC GCGCTATCGG CGACGCCTAT ATCGACGCCT ACCTGCCGAT CGTCCAGCGC
CGCAAGCACA CGCCGTTCGA TGAACGGCAG CGAGAGTTCC AGGCCTATCG TCGCGGTCGC
TACGTGGAGT TCAACCTGGT CTTCGATCGT GGCACCCTGT TCGGCCTGCA GTCCGGCGGC
CGTACCGAAT CGATCCTGAT GTCGTTGCCG CCGCAGGTGC GCTGGGGCTA TGACTGGAAA
CCCGAGCCGG GCAGCGAGGA AGCGCGCCTG ACCGAGTATT TCCTCGCCGA CCGCGATTGG
CTCGCCGGCC AGCCCTGA
 
Protein sequence
MTDRIAAVKT YLLDLQDRIC AALEAEDGKA RFAEDAWERP AGGGGRTRVI GDGALIEKGG 
VNFSHVFGDS LPPSASAHRP ELAGRGFQAL GVSLVIHPEN PHVPTSHANV RFFCAEKEGE
EPVWWFGGGF DLTPYYAHEE DCVHWHRVAR DACAPFGADV YPRYKEWCDR YFHLKHRNEP
RGIGGLFFDD LNQWDFDTCF AFIRAIGDAY IDAYLPIVQR RKHTPFDERQ REFQAYRRGR
YVEFNLVFDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK PEPGSEEARL TEYFLADRDW
LAGQP